Gene Sfri_1631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1631 
Symbol 
ID4277290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1943680 
End bp1944279 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content39% 
IMG OID638134416 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_750320 
Protein GI114562807 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGATG TGATCGCAGA TGCGTTAGTC GATAAAGGGT ATATCCTTTT ATCTGATATC 
ATTCCTGATT ATGTAAGTTT AGCCTTGCTT GAAAAAATGC AAGCTCAGCA AGATATTGAT 
TTTAAAAAAG CTGCCATTGG TCGAGGTATT GAACAACAAA TCAATACTGA AATTCGCTCG 
GATAAAATTA GCTGGTTAGA CAATCAAGAT CATACCGACC GTGAATATTT ATCGATTATG 
AGCCAATTGA AAGATGGGCT AAATCGTCGT TTGTTTATGG GACTGTTTGA CTTTGAAAGT 
CACTATGCTG TTTATGAGCC TGGTGCTTTT TATAAAAAAC ATGTTGATGC GCTGCATGGC 
AGCCAAAATC GTATTTTATC GACCGTATTT TTCTTGAATC CAGATTGGCA AGACAGCGAT 
GGTGGCGAAT TGATCATTTA TGATGAGTTT GATGCACCTT TAGAAGTCGT TAATCCTAAC 
ATTGGTACCT TGGTACTGTT TTTAAGTGAA CGCTTTCCGC ATGAAGTCAG GCCGACCACA 
AAAACCCGTA ATAGTATTGC CGGCTGGTTT AGGGTGAGTA ACGCAAATCA CGGTTTTTAA
 
Protein sequence
MLDVIADALV DKGYILLSDI IPDYVSLALL EKMQAQQDID FKKAAIGRGI EQQINTEIRS 
DKISWLDNQD HTDREYLSIM SQLKDGLNRR LFMGLFDFES HYAVYEPGAF YKKHVDALHG 
SQNRILSTVF FLNPDWQDSD GGELIIYDEF DAPLEVVNPN IGTLVLFLSE RFPHEVRPTT 
KTRNSIAGWF RVSNANHGF