| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1628 |
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| Symbol | |
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| ID | 4277287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1937928 |
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| End bp | 1939646 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134413 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_750317 |
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| Protein GI | 114562804 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAGC TTTCTGGCGC GAGTATGATC GTGCGCTCAC TAATAGATGA AGGTGTCAGC
CATATCTTCG GTTATCCCGG CGGTTCGGTG TTAGACATCT ATGATTCTCT GCATAAAATA
TCTGGTATTG AACACATCCT AGTTCGTCAT GAACAAGCTG CTGTACACAT GGCTGATGGT
TATGCCCGTG CAACTGGCAA AGTTGGTGTC GTGTTAGTCA CTTCAGGCCC TGGTGCTACC
AATGCTATTA CAGGTATTGC CACCGCTTAC ATGGATTCAA TCCCACTGGT TGTGTTGTCT
GGTCAAGTGC CGAGTAATTT GATTGGTAAT GATGCCTTCC AAGAATGCGA CATGATTGGT
ATTTCTCGCC CAATCGTTAA GCACAGTTTT TTAATAACAG ACGCTAAAGA CATTCCAGAA
ACAGTTAAAA AAGCCTTTTT CATTGCCGCT ACTGGCCGCC CGGGCCCTGT GGTCATTGAT
TTGCCTAAAG ACTGTTTAAG CCCAGATATA CTGCATGATT ATGTTTATCC AGACAGCGTT
AAAATGCGTT CGTATAACCC CACTACATCA GGTCATAAAG GCCAAATTCG TCGAGGCTTG
CAAGCCCTGT TAGCGGCTAA AAAACCGGTA TTATATGTCG GTGGTGGCGC GGTTATTTCG
GGTTGTGATG CACAAATACT TGCCCTTGCC GAACGTTTAA ACATCCCCGT CGTGAGTACC
TTGATGGGCT TAGGCGCGTT TCCTGGCACC CATAAGCAGA GTTTAGGCAT GCTAGGAATG
CATGGTTTAT ACGAAGCGAA TATGGCAATG CACAACACCG ATTTAATCTT TGGTATTGGG
GTCCGTTTTG ACGACCGCAC CACCAACAAT GTTGAAAAGT ATTGTCCTAA CGCAACCATT
TTACACATCG ATATTGATCC ATCTTCTATC TCTAAAACGG TTCGGGTCGA TATTCCAATT
GTTGGCTCTG CCGATAATAT TTTAGACGGC ATGTTAGATC TACTTGATGA ATCAAAAGAC
ACTAATGATG CTACCGCGAT GGCTGCATGG TGGAGCGACA TTGAAATTTG GCGTTCACGT
AAGAGCTTAG AGTTCGATCG CACTACCGAT AGAATCAAAC CACAACAAGT TATTGAAACA
TTGTACAAAC TCACCAATGG TGACGCTTAT GTGGCGTCGG ATGTCGGCCA GCATCAAATG
TTTGCCGCGT TATATTACCC GTTCGATAAA CCACGCCGTT GGATTAACTC AGGTGGATTA
GGCACCATGG GCTTTGGTTT GCCTGCGGCA ATGGGCGTTA AAATGGCGTT CCCTGAAGCT
ACCGTGGTGT GCGTTACGGG CGATGGTTCT ATCCAAATGA ACATTCAGGA GCTTTCAACG
GCACTGCAAT ATGATACTCC GGTTAAAATT ATCAACCTAA ACAACCGTTT CCTTGGCATG
GTAAAACAGT GGCAAGACAT GATTTATTCA GGTCGTCATT CCCATTCTTA TATGGATTCT
GTGCCTAATT TTGCCAAAAT TGCTGAAGCC TATGGTCATG TTGGTATGAA CATTAGTCAC
CCAGATGAAC TTGAATCTAA GCTCGCTGAA GCGTTGGCGA TGAAAGACAA GTTAGTGTTT
GTTGATATCA GCGTAGATGA AACGGAACAC GTTTACCCAA TGCTCATTCG CGGCGGCGCG
ATGAACGAAA TGTGGCTAAG CAAAACGGAG AAAAGCTAA
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| Protein sequence | MEKLSGASMI VRSLIDEGVS HIFGYPGGSV LDIYDSLHKI SGIEHILVRH EQAAVHMADG
YARATGKVGV VLVTSGPGAT NAITGIATAY MDSIPLVVLS GQVPSNLIGN DAFQECDMIG
ISRPIVKHSF LITDAKDIPE TVKKAFFIAA TGRPGPVVID LPKDCLSPDI LHDYVYPDSV
KMRSYNPTTS GHKGQIRRGL QALLAAKKPV LYVGGGAVIS GCDAQILALA ERLNIPVVST
LMGLGAFPGT HKQSLGMLGM HGLYEANMAM HNTDLIFGIG VRFDDRTTNN VEKYCPNATI
LHIDIDPSSI SKTVRVDIPI VGSADNILDG MLDLLDESKD TNDATAMAAW WSDIEIWRSR
KSLEFDRTTD RIKPQQVIET LYKLTNGDAY VASDVGQHQM FAALYYPFDK PRRWINSGGL
GTMGFGLPAA MGVKMAFPEA TVVCVTGDGS IQMNIQELST ALQYDTPVKI INLNNRFLGM
VKQWQDMIYS GRHSHSYMDS VPNFAKIAEA YGHVGMNISH PDELESKLAE ALAMKDKLVF
VDISVDETEH VYPMLIRGGA MNEMWLSKTE KS
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