| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1624 |
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| Symbol | |
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| ID | 4277283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1933504 |
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| End bp | 1934271 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134409 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_750313 |
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| Protein GI | 114562800 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0548574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGC AACTTATTGC CGCAACAATT ATTTCTACCA TGATGATTTC AAACGTCAGT
TGGGCAAATG ACAATGACCA TGGCATGAGC GAAGAGCGCG AACACACAGA AGAGTTAGTG
GGTTTGAGTT CTGGGATTTT ACTCGGCGCA GTTATCGGCG GCCCAGTGGG TGCCATTATT
GGTGCATTTA CGGGTACGTT TATTGGTAAG TCGGTTGGCG ATGAAGCAGA ACTCAGCGTC
CAGAAACAAC AATTGGTGCA GCAAGAGAAA AAATTAACGC AAACTAACGA GCAATTAATG
GCATTGAGTA CTAAGCAGCA GTCGTTGGAG CAAGTGTCGG AGAAATATTA TCAATTACAG
TCTAACTTGG CTGAACAAAA AGTGAATCAA CAACAAACAC TTAATGAGTT AACCATTGGG
ATGAATGTGC AGTTTAAAAC CGGATTGAGC CATATTGAGC CGTTATTTGA ACAACAATTA
GATAATGTGG CTTACATGAT GAGCTTGTCA CCAGAATTAA CCATTGATTT AACCGGTTAT
GCCGACCGCC GTGGTGATAA TGATTTCAAC CAAGCCTTGT CTGAACAGCG TTTAGCCGAA
GTGACACAAT ACTTAGTTAC CCAAGGCATT GCCCGCGAGC GTTTGCATGG ACAGGCTTAT
GGTTCAACGT TGCCAATGCA CCAGGAACAA AACTTTGAAA ACGACTTTTT TGATCGTCGG
GTGACGCTCA AGTTATTAGC CCCAGGTGCT GAACTTGCTG CTAACTAA
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| Protein sequence | MKKQLIAATI ISTMMISNVS WANDNDHGMS EEREHTEELV GLSSGILLGA VIGGPVGAII
GAFTGTFIGK SVGDEAELSV QKQQLVQQEK KLTQTNEQLM ALSTKQQSLE QVSEKYYQLQ
SNLAEQKVNQ QQTLNELTIG MNVQFKTGLS HIEPLFEQQL DNVAYMMSLS PELTIDLTGY
ADRRGDNDFN QALSEQRLAE VTQYLVTQGI ARERLHGQAY GSTLPMHQEQ NFENDFFDRR
VTLKLLAPGA ELAAN
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