| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1622 |
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| Symbol | |
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| ID | 4277281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1930379 |
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| End bp | 1932550 |
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| Gene Length | 2172 bp |
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| Protein Length | 723 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134407 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_750311 |
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| Protein GI | 114562798 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTTAC CGATAGGGCT GCGTGCCAAG GTCGTCATTT TGTCGCTGTT TTTACTCTGC
CTACCATGGC TTGGGTATGA ATATGTGTGG GAAATGGAAA AGTACCTGCG TTATGGCCAA
GAAAAAACCC TTGAAGGTAC CACTCAAGCG CTTGCTACGG CGCTACATGA GCGACCAAAA
TTATTTGACA ACCAAGCCAG CTTTTTAAAC CAAGTTGAAA AAGGCCGCGA CTTATACGCC
TACCCGTTAG CTGGGCCCAT TCAACTCGAC GGTAAACTGA GTGACTGGGA CTTATACCAA
CATCGCACCC TTAGCTATTC AGACAAACAT GTTATTTATC AGCGAAGCGA AACTGAGCCA
ATCGATATTA GCTTTAGCCA TATGGTGGGC AAATACGGCG GCTATTTATA CGGATTTTTC
AACGTCAATG ACCCGAACCT GATTTTCCGT AACCGTAAAA GCTTACGCAT TGATAGAAAC
GATCACTTAG TCATGGCGAC TCAATCACCA GACGGTCAGT TCAGGCGTTA TATTATTGCC
AATACCAAAA GTGGTTGGCT TAGTGCGTTT GAATTACCCG CCGACCCCAG CCAATCGATG
CCCGTTACCC CCGAGTCACG CATTCAAGGC CAGTGGTTAA AAACAGCCAA AGGATACAAT
ATTGAATTTA GACTGCCACT TGAAATGGTA GGCAGTAAAT TAGGTTTTGC GATTCATAAT
GTAAACGATA CAAAAACACG TCAATTAGTG AATGTTATTG GTACCTCAGC CACCGATTCA
GTAGCCAGTT TAGGTACGGT ATTAGTGCCC TCGCCTGAAA TTGAAAATAT CATTAAAGGC
ATGAGCCACA ATAGCTCACG TATTTGGGTA GTGGATAATC ATGGCCGCGT ACTGGCAAAA
TCTGGTGATA TTCGTTCATC GTCCAACACC TGGGCAGATG ATATCGAGGT CAATCAACCT
GACTCGTTTT GGCTGCATTT TAAGCAGCAA TATATTCTGC CGTTGTACTA CAAAATATTG
ACTCGTCCGC CACAAGACTT TATCGATTCA CTGCAAGACT CAACTGAACT CACTGGCAGC
CATATTGAAA AAGCCTTAAG CGGCAAACAA GGCTCTACAT GGCGCTTAAC CCCAGACAAC
AAAGCCGTAG TATTAGCCGC TGCAAGCCCT ATATGGATTG ACGATAAAGT CATGGGAGTC
GTTATTGCAG AAGAAACCAC TCACGGCATT CGCAGCCTGC GTAACCGCGC ACTGGAAAAA
CTGTTTAACG TTATTTTGAC CATTATGAGC ATGGGCACAT TAGCCTTGTT TATTTTTGCC
TCGAGTATTT CAAGCCGCAT CCGCCGTTTA CGTGATCAGG CCGAACTCGC TATCGACAGC
CAGGGCCGAG TAAGACAGCA AATTGTCGCA TCCAAAAACC GAGATGAAAT AGGTGACTTG
TCACGCAGCT TTTCAAGTAT TGTCAGTCGC CTAGGACAAT ACACTCATTA TTTAGAAAAC
ATGTCGTCAC GTTTATCGCA CGAACTGCGT ACCCCTGTTG CCGTGGTGCG CAGCTCACTT
GAACACTTAG GCTTGCAACA ACTGGACGAG CAATCACAAA AATATGTTAG CCGCGCCCAA
GAAGGTGTCA GCCGCTTACA CCTTATTTTA AATAACTTAA GCGAAGCAAC TCGTCTTGAA
GCCAGTTTGA CACAAGCTGA AAGCTGTCGT TTTTCATTAA AGAAAGTGAT TAGCGGTTGC
ATGCAAGGCT ACCAAATTAC TTATCCAGAC CAACTGTTTG CTGTTCACAT TGAAGACAAA
GTTATGTCTT GCGACGGTGT GCCGGAATAC ATCGCCCAAT TAATGGATAA ACTGATCAAC
AATGCCATTG AATTTCATCA GCCCGACAGC GCCATCACCG TCAGCCTGAC CCAATATCAT
AAACAGGCAA TATTAAAAGT CAGTAACATC GGTCCCTTAC TGCCAAAAGA CATGAACAGC
CAAATTTTTG AATCTATGGT GTCTATCAGG CCTCAAGGTA TTAATGGCAA GCCTCATCTT
GGTTTAGGCT TGTATATTGC CCGATTAGTT ACCGACTTCC ACCATGGCAG CATTAAAGCA
ACCAACATGA TAGAGAACGG CATTGAAGGG GTTGAAATAT GCCTGACGTT ACCCTTGAGT
GATGAAAAAT AG
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| Protein sequence | MNLPIGLRAK VVILSLFLLC LPWLGYEYVW EMEKYLRYGQ EKTLEGTTQA LATALHERPK
LFDNQASFLN QVEKGRDLYA YPLAGPIQLD GKLSDWDLYQ HRTLSYSDKH VIYQRSETEP
IDISFSHMVG KYGGYLYGFF NVNDPNLIFR NRKSLRIDRN DHLVMATQSP DGQFRRYIIA
NTKSGWLSAF ELPADPSQSM PVTPESRIQG QWLKTAKGYN IEFRLPLEMV GSKLGFAIHN
VNDTKTRQLV NVIGTSATDS VASLGTVLVP SPEIENIIKG MSHNSSRIWV VDNHGRVLAK
SGDIRSSSNT WADDIEVNQP DSFWLHFKQQ YILPLYYKIL TRPPQDFIDS LQDSTELTGS
HIEKALSGKQ GSTWRLTPDN KAVVLAAASP IWIDDKVMGV VIAEETTHGI RSLRNRALEK
LFNVILTIMS MGTLALFIFA SSISSRIRRL RDQAELAIDS QGRVRQQIVA SKNRDEIGDL
SRSFSSIVSR LGQYTHYLEN MSSRLSHELR TPVAVVRSSL EHLGLQQLDE QSQKYVSRAQ
EGVSRLHLIL NNLSEATRLE ASLTQAESCR FSLKKVISGC MQGYQITYPD QLFAVHIEDK
VMSCDGVPEY IAQLMDKLIN NAIEFHQPDS AITVSLTQYH KQAILKVSNI GPLLPKDMNS
QIFESMVSIR PQGINGKPHL GLGLYIARLV TDFHHGSIKA TNMIENGIEG VEICLTLPLS
DEK
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