Gene Sfri_1617 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1617 
Symbol 
ID4277276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1926194 
End bp1926652 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content34% 
IMG OID638134402 
Producthypothetical protein 
Protein accessionYP_750306 
Protein GI114562793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGCA TGATAGTTTT AATCTTATTA GTATTTTTTT CTTGTAAGGT AACAGCCGAT 
ACAAATGTTG ATAGTCAAAA TGTAACAAGA GCGGTGCTCG ACTATATAGA ATCGCAACAC
AACGTCGAGC CGGAGTTGAT GAGAAGAGGC GTTGATAAAA AGTTAGCTAA AAGAACTTAT
TGGCAATCTA AAGATGGCTC AGAAATTATA ATGGAAACTG ACTTTGACAC TATGGTGTGG
GTGGCTGAAA ACTATAACAA AGAGGGTAAT AAATTCCCGT CATCTCCTAA AGTTGATATC
AATATTTTGG ATATTGATAA TAGAGTTGCA TCGGTAAAAT TAACCGTCGA TGAGTGGATT
GATTACATGC ATCTATATAA AAATGAAAAT AATGAGTGGA AAATAATTAA CGTTTTGTGG
CAATACAATG ATCCGGCAAA ACATTCGAGT AAACCGTAA
 
Protein sequence
MNRMIVLILL VFFSCKVTAD TNVDSQNVTR AVLDYIESQH NVEPELMRRG VDKKLAKRTY 
WQSKDGSEII METDFDTMVW VAENYNKEGN KFPSSPKVDI NILDIDNRVA SVKLTVDEWI
DYMHLYKNEN NEWKIINVLW QYNDPAKHSS KP