| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1614 |
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| Symbol | |
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| ID | 4277273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1920904 |
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| End bp | 1921788 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134399 |
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| Product | transcriptional regulator, LysR family protein |
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| Protein accession | YP_750303 |
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| Protein GI | 114562790 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGTATT TCAGTAAAGT GGTCGAAACA GGCAGTTTTA CCAAAGCGGC GAGTGCGTTT
AATGTGCCGC CATCATCTTT GTCGAGACGC GTTGCTGATT TAGAGAAGAG TTTGGGAGCG
ACGTTATTAA AGCGTTCGAC CCGAATTGTT AAACTAACCG AAGTGGGGCA GATTTATTAC
AACGATGTCC AACAAATATT GAATCAGCTA GCGCAAAGCC ATGAAACAGT TCGTAGTTAC
CAAACAACGC CAATGGGACG TTTGCGGATC AGTTCGATGG TAGGGTTTGG TGACAAGATA
TTACTGCCGT TGTTAGATGA ATTCAGCACG TTATACCCTC AAATTGTTTT AGATGTCAGT
TTTAGCGACG AGTTATCAAC ACTTGGACGT GACGATGTTG ATATTGCTAT TCGCGGTGGT
TATGCGCCCA ATGAACGCGT GTTAGCAATA AGACTGATGG ACAATGGTTT CATTCCTGTG
GCGTCACCAA GTTACATAGA AAAACACGGT ATACCAAATA ATGCGATGGA ATTAACGCAA
CATAATGGCC TGTATTTTAA AGCACCAACA GGGCCAACTC CTTGGTTATG TAATATGAAC
GGCCAATGGC ATGATGTCTC TGGACCGGCG GTAGCTATTT CAAATAACGG CCCTTGGCTG
GCAAAAAAAG CTTGTAACGG AGAGGGCATT TTAATGTCAA CTCGTTGGGC GTTAGCGTCT
TATCTAGAGT CTGGTAAATT GGTAGAGCTT AAGTTTGAAC ATGAGTTAGC GATAACTCAA
CATTCTGATA TGGCGGTTTA TTTGTTGTAT CAAAAACAGC GCTACTTAGT CCCAAAAGTA
AAAGCGGCAG TAGACTTTTT AGTGGAAAGA ATAAAAGTGA AATGA
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| Protein sequence | MRYFSKVVET GSFTKAASAF NVPPSSLSRR VADLEKSLGA TLLKRSTRIV KLTEVGQIYY
NDVQQILNQL AQSHETVRSY QTTPMGRLRI SSMVGFGDKI LLPLLDEFST LYPQIVLDVS
FSDELSTLGR DDVDIAIRGG YAPNERVLAI RLMDNGFIPV ASPSYIEKHG IPNNAMELTQ
HNGLYFKAPT GPTPWLCNMN GQWHDVSGPA VAISNNGPWL AKKACNGEGI LMSTRWALAS
YLESGKLVEL KFEHELAITQ HSDMAVYLLY QKQRYLVPKV KAAVDFLVER IKVK
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