| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1605 |
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| Symbol | |
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| ID | 4277264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1910067 |
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| End bp | 1910813 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638134390 |
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| Product | UMP phosphatase |
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| Protein accession | YP_750294 |
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| Protein GI | 114562781 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0647] Predicted sugar phosphatases of the HAD superfamily |
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| TIGRFAM ID | [TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000109056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA TTATTTGCGA TATTGATGGT GTGCTACTGC ATGACAACAA GCTAATCCCA
GGAAGCGACA AGTTTATTCA CCGCGTACTT GAACAAGGCA ATCCGCTGGT TATCCTCACT
AATTATCCCG TTCAAACTGG TAAAGACTTA CAAAATCGAC TCGGCGCTGC AGGTATTAAT
GTACCAGAAA CCTGCTTTTA TACCTCAGCC ATGGCTACAG CAGACTTTCT GAAACACCAA
ACAGGGAATA AAGCTTATGT GATTGGCGAA GGTGCACTGA CTCACGAGCT TTACAACGCA
GGTTTTACCA TAACTGATAT TAACCCAGAC TTTGTCATTG TGGGTGAAAC CCGCTCTTAC
AACTGGGACA TGATCCATAA AGCATCTCGT TTTGTTGCTG GCGGCGCACG CTTTATTGCA
ACCAACCCAG ACACCCACGG CCCGGCATTT AGCCCAGCAT GTGGCGCATT ATGTGCAGCC
ATTGAGCGTA TTACAGGTAA GATGCCATTT TATGTGGGTA AGCCTAGCTC GTGGATTATT
CGCTCTGCGT TGAATCATAT TCAGGGTCAT TCTGAAAACA CCGTGATTAT CGGCGATAAC
ATGCGCACCG ATATTCTGGC TGGCTTCCAA GCGGGCCTGG AAACGATTCT AGTGACAACT
GGTGTGAGCC AAATGAGTGA TATAGACAAA GAACCTTTCA GACCAAATCA CGTGTTTGCC
TGCGCTGGTG ATATCGACGT CGTTTAA
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| Protein sequence | MKNIICDIDG VLLHDNKLIP GSDKFIHRVL EQGNPLVILT NYPVQTGKDL QNRLGAAGIN
VPETCFYTSA MATADFLKHQ TGNKAYVIGE GALTHELYNA GFTITDINPD FVIVGETRSY
NWDMIHKASR FVAGGARFIA TNPDTHGPAF SPACGALCAA IERITGKMPF YVGKPSSWII
RSALNHIQGH SENTVIIGDN MRTDILAGFQ AGLETILVTT GVSQMSDIDK EPFRPNHVFA
CAGDIDVV
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