Gene Sfri_1602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1602 
SymbolasnB 
ID4277994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1905474 
End bp1907138 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content44% 
IMG OID638134387 
Productasparagine synthetase B 
Protein accessionYP_750291 
Protein GI114562778 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0367] Asparagine synthase (glutamine-hydrolyzing) 
TIGRFAM ID[TIGR01536] asparagine synthase (glutamine-hydrolyzing) 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.50362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTTCAA TATTTTCAAT TTTAGACATC AAAACTGATG CAAGCAAACT TCGCCAAGTG 
GCGTTAGAAA TGTCAAAACT ACTGCGTCAC CGCGGCCCAG ATTGGTCTGG CATATATGCA
GATGACAAAG CCATTTTAGC GCATGAACGT TTATCGATTG TTGACGTTGA CCACGGAGCG
CAACCGCTTA TCAGCCTTGA TGGCAACATA GTATTAGCCG TAAACGGTGA AATTTATAAC
CACAAGCAGT TAAAAGCTCA GCTAGGTGAC AAATACCAGT ATCAAACTAA CTCAGATTGC
GAAGTGATCT TGTCATTGTA CCAAGAATAC GGTTGTGACT TTTTAGACAA ACTGAACGGT
ATCTTCGCAT TCGTACTGTA TGACAAAGCC AAAGGCACTT ACTTAATCGG TCGCGACCAC
ATGGGCATTA TCCCACTTTA TACTGGTCTA GATTCGTCTG GTAACTTCTA CGTTGCCTCT
GAAATGAAAG CTCTCATGCC CGTGTGTAAA ACGGTTGCAG AGTTTTACCC AGGACAGTAT
TTATATTCTG CCGACGGTAA ACCAACCCAG TATTATCACC GTGACTGGCG TGATTTTGAT
GCCGTTAAAG ATAACCCAGC TAGCATTGAA GAATTACGTG AAGCATTAGA AGCAGCGGTA
AAACGCCAGT TAATGTCTGA TGTTCCTTAC GGAGTATTAT TGTCTGGTGG CCTAGATTCA
TCAGTGATTT CTGCCATTAC TCAAACATAT GCAAAACACC GTATTGAAAA CGACGGCGAA
ACAGGCGCAT GGTGGCCACA ACTGCATTCA TTTGCAGTAG GGTTAGCTGA GTCTCCTGAT
TTGGTCGCGG CGCAAAAAGT GGCAGATGCT ATTGGTACAA TTCATCACCC TATTGTGTAT
ACCTTCCAAG AAGGCTTAGA TGCGATTAAA GAAGTGATTT ATCACTTAGA AACTTACGAC
GTAACCACTA TTCGTGCCGC TACGCCAATG TATTTAATGG CACGTAAAAT TAAAGCCATG
GGCATTAAAA TGGTGTTGTC TGGCGAAGGT GCTGACGAAC TATTTGGTGG TTATCTGTAT
TTCCATAAAG CGCCTAACGC CCAAGCGTTC CATGAAGAAT TAGTGCGTAA ACTTGATAAG
CTGCATTTAT TTGATTGCTT GCGTGCCAAC AAAGCCATGG CAGCATGGGG ACTTGAAGCA
CGTGTTCCTT TCTTAGATAA AGAGTTTATT GACGTAGCAA TGCGCATCAA CCCTGAAGCG
AAGATGTCTA AAGATGGTCG TATCGAGAAG CACATTTTAC GTCAAGCGTT TGAGCACAAA
TTACCAAAAG AAGTGGTATG GCGCCAAAAA GAGCAGTTCA GTGACGGCGT AGGTTACTCG
TGGATTGATG GCTTAAAAGC CCATGCGGCA GAAAACGTAG ATGACGTGCA ATTTGCTAAC
GCAAAATTCC GTTTCCCATA CAACACGCCA GAGTCGAAAG AAGCCTATTT CTACCGCAGC
TTCTTTGAAG AGTTTTTCCC ATTAGCCAGT GCCGCTGAAA CAGTGCCAGG TGGAAAAACC
GTTGCTTGTT CAACCCCTGA AGCACTATTG TGGGATGCAA GTTTACAAGG ACTTAACGAC
CCATCGGGCC GCGCAGTTAA AAATGTTCAC GCTAGCGCAT ATTAG
 
Protein sequence
MCSIFSILDI KTDASKLRQV ALEMSKLLRH RGPDWSGIYA DDKAILAHER LSIVDVDHGA 
QPLISLDGNI VLAVNGEIYN HKQLKAQLGD KYQYQTNSDC EVILSLYQEY GCDFLDKLNG
IFAFVLYDKA KGTYLIGRDH MGIIPLYTGL DSSGNFYVAS EMKALMPVCK TVAEFYPGQY
LYSADGKPTQ YYHRDWRDFD AVKDNPASIE ELREALEAAV KRQLMSDVPY GVLLSGGLDS
SVISAITQTY AKHRIENDGE TGAWWPQLHS FAVGLAESPD LVAAQKVADA IGTIHHPIVY
TFQEGLDAIK EVIYHLETYD VTTIRAATPM YLMARKIKAM GIKMVLSGEG ADELFGGYLY
FHKAPNAQAF HEELVRKLDK LHLFDCLRAN KAMAAWGLEA RVPFLDKEFI DVAMRINPEA
KMSKDGRIEK HILRQAFEHK LPKEVVWRQK EQFSDGVGYS WIDGLKAHAA ENVDDVQFAN
AKFRFPYNTP ESKEAYFYRS FFEEFFPLAS AAETVPGGKT VACSTPEALL WDASLQGLND
PSGRAVKNVH ASAY