Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1602 |
Symbol | asnB |
ID | 4277994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 1905474 |
End bp | 1907138 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638134387 |
Product | asparagine synthetase B |
Protein accession | YP_750291 |
Protein GI | 114562778 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.50362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTTCAA TATTTTCAAT TTTAGACATC AAAACTGATG CAAGCAAACT TCGCCAAGTG GCGTTAGAAA TGTCAAAACT ACTGCGTCAC CGCGGCCCAG ATTGGTCTGG CATATATGCA GATGACAAAG CCATTTTAGC GCATGAACGT TTATCGATTG TTGACGTTGA CCACGGAGCG CAACCGCTTA TCAGCCTTGA TGGCAACATA GTATTAGCCG TAAACGGTGA AATTTATAAC CACAAGCAGT TAAAAGCTCA GCTAGGTGAC AAATACCAGT ATCAAACTAA CTCAGATTGC GAAGTGATCT TGTCATTGTA CCAAGAATAC GGTTGTGACT TTTTAGACAA ACTGAACGGT ATCTTCGCAT TCGTACTGTA TGACAAAGCC AAAGGCACTT ACTTAATCGG TCGCGACCAC ATGGGCATTA TCCCACTTTA TACTGGTCTA GATTCGTCTG GTAACTTCTA CGTTGCCTCT GAAATGAAAG CTCTCATGCC CGTGTGTAAA ACGGTTGCAG AGTTTTACCC AGGACAGTAT TTATATTCTG CCGACGGTAA ACCAACCCAG TATTATCACC GTGACTGGCG TGATTTTGAT GCCGTTAAAG ATAACCCAGC TAGCATTGAA GAATTACGTG AAGCATTAGA AGCAGCGGTA AAACGCCAGT TAATGTCTGA TGTTCCTTAC GGAGTATTAT TGTCTGGTGG CCTAGATTCA TCAGTGATTT CTGCCATTAC TCAAACATAT GCAAAACACC GTATTGAAAA CGACGGCGAA ACAGGCGCAT GGTGGCCACA ACTGCATTCA TTTGCAGTAG GGTTAGCTGA GTCTCCTGAT TTGGTCGCGG CGCAAAAAGT GGCAGATGCT ATTGGTACAA TTCATCACCC TATTGTGTAT ACCTTCCAAG AAGGCTTAGA TGCGATTAAA GAAGTGATTT ATCACTTAGA AACTTACGAC GTAACCACTA TTCGTGCCGC TACGCCAATG TATTTAATGG CACGTAAAAT TAAAGCCATG GGCATTAAAA TGGTGTTGTC TGGCGAAGGT GCTGACGAAC TATTTGGTGG TTATCTGTAT TTCCATAAAG CGCCTAACGC CCAAGCGTTC CATGAAGAAT TAGTGCGTAA ACTTGATAAG CTGCATTTAT TTGATTGCTT GCGTGCCAAC AAAGCCATGG CAGCATGGGG ACTTGAAGCA CGTGTTCCTT TCTTAGATAA AGAGTTTATT GACGTAGCAA TGCGCATCAA CCCTGAAGCG AAGATGTCTA AAGATGGTCG TATCGAGAAG CACATTTTAC GTCAAGCGTT TGAGCACAAA TTACCAAAAG AAGTGGTATG GCGCCAAAAA GAGCAGTTCA GTGACGGCGT AGGTTACTCG TGGATTGATG GCTTAAAAGC CCATGCGGCA GAAAACGTAG ATGACGTGCA ATTTGCTAAC GCAAAATTCC GTTTCCCATA CAACACGCCA GAGTCGAAAG AAGCCTATTT CTACCGCAGC TTCTTTGAAG AGTTTTTCCC ATTAGCCAGT GCCGCTGAAA CAGTGCCAGG TGGAAAAACC GTTGCTTGTT CAACCCCTGA AGCACTATTG TGGGATGCAA GTTTACAAGG ACTTAACGAC CCATCGGGCC GCGCAGTTAA AAATGTTCAC GCTAGCGCAT ATTAG
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Protein sequence | MCSIFSILDI KTDASKLRQV ALEMSKLLRH RGPDWSGIYA DDKAILAHER LSIVDVDHGA QPLISLDGNI VLAVNGEIYN HKQLKAQLGD KYQYQTNSDC EVILSLYQEY GCDFLDKLNG IFAFVLYDKA KGTYLIGRDH MGIIPLYTGL DSSGNFYVAS EMKALMPVCK TVAEFYPGQY LYSADGKPTQ YYHRDWRDFD AVKDNPASIE ELREALEAAV KRQLMSDVPY GVLLSGGLDS SVISAITQTY AKHRIENDGE TGAWWPQLHS FAVGLAESPD LVAAQKVADA IGTIHHPIVY TFQEGLDAIK EVIYHLETYD VTTIRAATPM YLMARKIKAM GIKMVLSGEG ADELFGGYLY FHKAPNAQAF HEELVRKLDK LHLFDCLRAN KAMAAWGLEA RVPFLDKEFI DVAMRINPEA KMSKDGRIEK HILRQAFEHK LPKEVVWRQK EQFSDGVGYS WIDGLKAHAA ENVDDVQFAN AKFRFPYNTP ESKEAYFYRS FFEEFFPLAS AAETVPGGKT VACSTPEALL WDASLQGLND PSGRAVKNVH ASAY
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