| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1590 |
|---|
| Symbol | |
|---|
| ID | 4277982 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella frigidimarina NCIMB 400 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008345 |
|---|
| Strand | + |
|---|
| Start bp | 1894108 |
|---|
| End bp | 1894938 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 638134375 |
|---|
| Product | Ion transport protein |
|---|
| Protein accession | YP_750279 |
|---|
| Protein GI | 114562766 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1226] Kef-type K+ transport systems, predicted NAD-binding component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCG AAGAAAAAGC CGACAGTCCA CTAAAACAGC AACTTAGAAG TGTGATTTTT
GGTACCGAAA CCCCAGCCGG AAAACGTTTC GATATCACCC TTATGGTGTG TATTGTATTG
AGTGTGATAT TGATTTTTAT CGATACCATT GAGCATATTA ACTCGCGGTA TGGCGACTAT
ATTAGTATTG CAGAATGGAC CTTTACTGTA TTCTTTACCG TTGAGTACAT ATTAAGGCTC
TATTGCTCCC TGAATCGGTT ACACTATGCA CGCAGCTTTT TTGGTGTAGT GGATTTAGTG
TCCATTTTAC CCAGTTATTT AGGGTTGATT TTCCCAGGTG CCAATGTCGC GCTAGCGCTA
AGAGTACTGC GTTTATTCCG TGTATTTAGA GTGTTAAAGC TGCTGCGCTA TCTCAGTGAT
GGCAACTTAT TGATTAAAGC AATGATGCAG TCGAGCCGTA AAGTGTTTAT ATTTTTCTTT
TCGGTCAGCT TGATTATCAT GGTGTTAAGT GTGGTTATGT ATGTGGTCGA AGGGCCTAAT
AATGGCTTTA CTTCCATTCC TAAGTCGATG TATTGGACCG TGGTGACTAT TACCACCGTT
GGTTACGGAG ATATTACGCC GCAAACCCCA TTGGGCCAGG GAATTGCAGC GCTCACTATG
TTGATTGGTT ATTCGATTAT TGCAATCCCA ACCGGTATTT TAACTGCTGA AATTTCACAT
GAAATGGTCA GAACCCGTGA TTTACGTAAA TGCAGTAATT GTGGTAAAAA AGGCCACGAT
AACGATGCCG AATATTGTAA TCATTGTGGT AGCGAGCTTG AAAAACTCTA G
|
|---|
| Protein sequence | MNIEEKADSP LKQQLRSVIF GTETPAGKRF DITLMVCIVL SVILIFIDTI EHINSRYGDY
ISIAEWTFTV FFTVEYILRL YCSLNRLHYA RSFFGVVDLV SILPSYLGLI FPGANVALAL
RVLRLFRVFR VLKLLRYLSD GNLLIKAMMQ SSRKVFIFFF SVSLIIMVLS VVMYVVEGPN
NGFTSIPKSM YWTVVTITTV GYGDITPQTP LGQGIAALTM LIGYSIIAIP TGILTAEISH
EMVRTRDLRK CSNCGKKGHD NDAEYCNHCG SELEKL
|
|---|
| |