| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1585 |
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| Symbol | |
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| ID | 4277977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1889982 |
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| End bp | 1891193 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134370 |
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| Product | major facilitator transporter |
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| Protein accession | YP_750274 |
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| Protein GI | 114562761 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTACTAG AGCTAACAAA AGTCCGCGTC TATTTTGCTG GTATCTGTAG TTTAATTGTC
ACGGTTGGGG TGGCTAGATT TTCCTATAGC TTGTTATTAC CGATAATGCA GGACGGTGCA
GGCCTAACTG AATCTGGTGG AGGTTGGTTA GCTAGTACTA ATTTTATGGG TTACATGTGT
GGGGTGTTAC TTGCCGCTAG CATGCACAAC CTTAACTACA AATATAACTT ACACCGGTTG
TACCTTATAT TGAGTGTCGT CACTTCAGCT GCAATGGTAA TGACCACTGA TATGGTGACT
TGGGCGGTAT TACGCTTTAT TGCCGGAATC TGCGCTTCAG GAGGCTTTAT TATTGCCTCT
GGCTTGATAT TAAAATGGCT AGTTAACCAT AATCACCGTG CAGAATTGGG CATTCACTTC
TCTGGTGCGG GCTTGAGCAT CATTGTTACC TCGATACTAA TAGAAGCCAT GCTGACCATG
TCAGCCGACT GGCAGCAACA GTGGCTAGCG TTAGCCGTGA TGGCAGCAAT ATTCTCGATC
CCTGCATGGT TATGGATGCC ACATCCTTTT GTTGGTGGTA AAGCGGGAGC AGGGGTCAAA
GATAATCCAC CAAGTAAAGC CTTTAAATCG TTAATGATGT TGGCTTATTT CTGTGCCGGT
TATGGTTATG CCGTCAGTTC GACTTTTATT GTTGATATTG TCGAACGTGT TGAAGGTTTA
CAAGGACAAG GAGGTGTTGC TTTTCTATTG GTAGGCGTCG CGGCAACACC AGCACCTTTA
ATATGGGATC AAATCGCCCG TCGAGTGGGT TACTTAAAAA CGCTATTAGC CGCCTATATC
TTACAGGCCG TAGGCATTAT TCTTCCTGCA ATCAATGACA GCTTACCTGT TGTTATATTA
AGTGCACTGT TGTTTGGTGG CACTTTTATC GCATGCGTCA GCCTAGTTTT GACCATGGCG
GGCAAGTTTT ATCCGAGTAA CCCGGCTAAG TTTATGGGCA CAATGACCTT AGCTTATGGT
GCAGCACAAA TTATTGCCCC CGTGTCTACC GGATATCTTG TTGAAGCACT GGGGAACTAT
GATATTGGCT TATACCTATC TGCCACTGTG GTAATGATGG GCACGCTGTT TTTGTTTGGA
TTGTTAAATC TTGATAAAGA CGCGATAAAA AACACAACCA TCAACATAGA AACTAAGCGC
ATTATTGGTT AA
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| Protein sequence | MLLELTKVRV YFAGICSLIV TVGVARFSYS LLLPIMQDGA GLTESGGGWL ASTNFMGYMC
GVLLAASMHN LNYKYNLHRL YLILSVVTSA AMVMTTDMVT WAVLRFIAGI CASGGFIIAS
GLILKWLVNH NHRAELGIHF SGAGLSIIVT SILIEAMLTM SADWQQQWLA LAVMAAIFSI
PAWLWMPHPF VGGKAGAGVK DNPPSKAFKS LMMLAYFCAG YGYAVSSTFI VDIVERVEGL
QGQGGVAFLL VGVAATPAPL IWDQIARRVG YLKTLLAAYI LQAVGIILPA INDSLPVVIL
SALLFGGTFI ACVSLVLTMA GKFYPSNPAK FMGTMTLAYG AAQIIAPVST GYLVEALGNY
DIGLYLSATV VMMGTLFLFG LLNLDKDAIK NTTINIETKR IIG
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