Gene Sfri_1582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1582 
Symbol 
ID4277974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp1886043 
End bp1887188 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content43% 
IMG OID638134367 
Productnitric oxide reductase 
Protein accessionYP_750271 
Protein GI114562758 
COG category[C] Energy production and conversion 
COG ID[COG1251] NAD(P)H-nitrite reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.753909 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCAC CTATCATTAT CATTGGTAGC GGCTTTGGCT CATATCAACT TATCAAGACC 
ATTAGACGCA CAGATAAGCA CTTACCGATA ACCGTTTTTA CCCTTGATGA AGGCCACGAT 
TACAATAAAC CGGATTTGAG CCATGTATTT AGTAACAAGC AAAACAGTGC TGATTTAATC 
CGTCTGAGTG CACAAGAGTT TGCCAGCGAG AATAATATTA CTCTGCATGC TTTTACCAAG 
GTTGATTGTA TTGATAGCGT TCAACAACAA GTGTTTGTTA ACGGCGTTGC TTATCCATAT 
GCAAAACTGG TGTTAGCGAC GGGAGCAAAA ACCTTTGTAC CACCTATGCT TGGCAATGCC 
ACTGACAGTG TTATTACCTT AAACAGTTTA AGTGAGTTTG ATAGCGCGCA GTTGCAACTA 
CAAAATGCAC AGACAGTTCT AGTGATTGGT GCAGGCATTA TCGGCACTGA AATAGCGATG 
GATCTTAATC ATAGTGGCAA AATAGTCGTG GTGGTTGAAC CAAGCCACGG CGTGATGGCG 
AGTATGTTGC CAGAGTTAGT CGCCAGTGCT TTACAAAAGA AAATGGTAAA TATGGGCGTG 
GTGTTTGAGT TTGGGCACAC GATTAGTTCG CTAAATAAAA CTGAATTAGG TATTTGTGCC 
ACACTCAGCT CTGGCCAAAC ATATACCGTG GATTGTGTTA TTTCAGCCGC AGGCTTAAAG 
GCTAATGTTG GCTTAGCACG TCAATCTGGA TGTAAAGTGA ATAAAGGTTT AGTGGTTAAT 
AATCAGCTGC AAACCTCAGT GAATAACATT TATGCCTTAG GCGATTGCGC CGAAATAAAC 
GGCAAGGTGA TGTCCTACTT ACAGCCAATT TTGTTAAGCG CCAATGCATT AGCAAAAACC 
TTACTCGGCC AACCAACAGA CTTGAAGTTA CCGGCTATGT TAGTCAAAGT TAAAACGCCG 
CACATGCCGA TCCAATTAGG CGGTAACACC GTAACCGATG TAGCCTCTTG GCAGGTGGAT 
ATTGATGCTC TGGGTTGTTC AGTAAAAGCC TACAACGAGC AAAAACAGAT TATCGGTTTT 
GTAGTAACAG AAGGACACAT GAACAATACC TTCCCGCTAC TCAGAGCCTT ACCAGCAAGT 
CTTTAG
 
Protein sequence
MSAPIIIIGS GFGSYQLIKT IRRTDKHLPI TVFTLDEGHD YNKPDLSHVF SNKQNSADLI 
RLSAQEFASE NNITLHAFTK VDCIDSVQQQ VFVNGVAYPY AKLVLATGAK TFVPPMLGNA 
TDSVITLNSL SEFDSAQLQL QNAQTVLVIG AGIIGTEIAM DLNHSGKIVV VVEPSHGVMA 
SMLPELVASA LQKKMVNMGV VFEFGHTISS LNKTELGICA TLSSGQTYTV DCVISAAGLK 
ANVGLARQSG CKVNKGLVVN NQLQTSVNNI YALGDCAEIN GKVMSYLQPI LLSANALAKT 
LLGQPTDLKL PAMLVKVKTP HMPIQLGGNT VTDVASWQVD IDALGCSVKA YNEQKQIIGF 
VVTEGHMNNT FPLLRALPAS L