| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1579 |
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| Symbol | cls |
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| ID | 4277971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1882456 |
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| End bp | 1883910 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134364 |
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| Product | cardiolipin synthetase |
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| Protein accession | YP_750268 |
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| Protein GI | 114562755 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.643479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTGAGC TTTATAAAAT ATTAACGATA ATCAGCGTAT TAGCTTATTG GCTGCTCATT
GCAGGTATCA CCACACGTAT TGTCTATAAA CGACGATCTA TTGGTGTTTC CTTAGCTTGG
ATGATGCTTA TTTATGTTGT CCCCATCTTA GGGATTTTAC TTTATTTTCT CGTTGGCGAG
ATGAATCTTG GCAAAACCCG CGCCGTGAGA TCTAAAGAAA TGTACGGTCC CTATCGAGAA
TGGTTTCGGC GGCTGTTTGC CATTCAGCAA TATCGCCCTC ATAACTTAAG TGATTACGCG
ACTCCCATTA GCCATTTGTG TGAAAAACGC CTTGGTATTC CTACGTTAGC CAATAATCAA
CTGACACTAA AATCGTCTAC AGAAACAATA TTAACAACCC TGATTGAAGA CATACAACAA
GCGCAAACCT CAATTCATTT AGAGTTCTAT ATTTGGTATC CAGGCGGACT TGCAGACCAA
GTTGCCGAAG CACTTATACA GGCAGCTCAA CGTGATGTGG CAGTGAGAAT ATTATTAGAC
GCTGCAGGAA GTCGAACCTT TTTTAACAGT AAATGGCCAA AACTAATGCG TAAAGCAGGT
ATACAGCTGG TTTCCGCACT GTCTGTTTCT CTTGTGCGTA TGATTTTCCG CCGCCTTGAC
CTTCGCCTTC ATCGAAAAAT AGTCGTGATA GACAACCAAA TCGGTTATAC CGGCTCAATG
AATCTAGTCG ACCCCAAATG TTTTAATCAA AGCGCCGGTG TTGGTGAGTG GATAGATGTT
ATGGTGAGGA TTACTGGCTC CAGTGTGCCA GTGCTTAACT GTATTCTCGC GTGGGATTGG
GAAACAGAAA CAGACCAAAG AATGTTACCC GAACCGCCAA AATGCCTTCC GCAAAAAGAA
GAGCCATCTG ACATGGTTCA AGTGATACCT TCAGGACCTG GTATGCCTGA GGATATGATC
CAGCAAGTTT TATTGCTCAG TATTTATCAA GCAAAACAGA GCATCACCAT CACTAGCCCT
TATTTTGTCC CCAGTGAAAA CCTACTGTTT GCATTAACTG CAGCGGCATT ACGTGGCGTG
GAGGTGAATT TAATCATACC CGACAAAAAC GACTCAATGA TGGTGGAATG GGCCAGCAGA
TCTTTCTTTG GTGAGTTACT GAATGCAGGT GTCAATATAC ATCGTTTTCG CGGTGGTTTA
CTGCACACAA AGTCAGTAGT CATTGACCTG CACCATAGTC TAATCGGCAC AGTTAATCTT
GATATGCGCA GCCTATGGCT TAACTTTGAA GTGACTCTTT CTGTTGAAAA TTTAGAATTC
ACTCAATCGC TTAGTGAAGT CCAACATCAA TATATGGCTA ATTCAATAAA AATGGATGCG
CGCCAGTGGC GTAAAAGACC GTTAGTTAAA CGATTAGTCG AGCAGTTTTT TTACTTATTT
AGCCCACTAC TTTAA
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| Protein sequence | MVELYKILTI ISVLAYWLLI AGITTRIVYK RRSIGVSLAW MMLIYVVPIL GILLYFLVGE
MNLGKTRAVR SKEMYGPYRE WFRRLFAIQQ YRPHNLSDYA TPISHLCEKR LGIPTLANNQ
LTLKSSTETI LTTLIEDIQQ AQTSIHLEFY IWYPGGLADQ VAEALIQAAQ RDVAVRILLD
AAGSRTFFNS KWPKLMRKAG IQLVSALSVS LVRMIFRRLD LRLHRKIVVI DNQIGYTGSM
NLVDPKCFNQ SAGVGEWIDV MVRITGSSVP VLNCILAWDW ETETDQRMLP EPPKCLPQKE
EPSDMVQVIP SGPGMPEDMI QQVLLLSIYQ AKQSITITSP YFVPSENLLF ALTAAALRGV
EVNLIIPDKN DSMMVEWASR SFFGELLNAG VNIHRFRGGL LHTKSVVIDL HHSLIGTVNL
DMRSLWLNFE VTLSVENLEF TQSLSEVQHQ YMANSIKMDA RQWRKRPLVK RLVEQFFYLF
SPLL
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