| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1577 |
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| Symbol | |
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| ID | 4277969 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1879897 |
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| End bp | 1881516 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134362 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_750266 |
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| Protein GI | 114562753 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2509] Uncharacterized FAD-dependent dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.903517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGTT TAAACCAAGT AAAATTGCCT CTCGACCATA ATGAAGATGC GCTGCAACAA
CTCGTCTTGC AAAGGCTCTC TATCTCAGCG GATCAGCTGG TTGATATACA TGTGTTTAAG
CGTGGCTACG ATGCCCGTAA AAAGAATTTA ATTTCGTTAA TTTATACATT AGATGTGACA
TTAGCCAACG TAGACGAAGC CGCGTTATTG GCATCACTTG CTGACGACCA TAATATCCGC
GTGTCGCCAG ATACCGACTA TAAATATGTC GCTACTGCAC CAGAAGGCTT AACGGAACGT
CCATTGGTGA TAGGCATGGG ACCATGCGGC TTATTTGTTG GGCTTATGTT GGCACAAATG
GGCTTTAAAC CGATTATTTT AGAGCGTGGA AAATCTGTCC ACGAACGCGC TAAAGATACC
TTCCGCTTTT GGCGTACCAG TGAGTTAAAC ACTGAATCAA ACGTACAATT TGGTGAAGGT
GGCGCTGGTA CATTCTCGGA TGGAAAGTTA TATAGCCAAG TTAAAGACCC TGGATTTAAA
GGCCTAAAAG TCAAACAAGA ATTTGTCGCT GCGGGTGCAC CAGCTGAAAT CATTTATGTT
AGTAAACCAC ACATAGGTAC CTTTAAGTTG GTCACCATGG TGGAAAAAAT GCGCCGCGAA
ATAATCCGTT TAGGCGGTGA AATTCGCTTT GAAACCCGTG TTGATGAAAT CAATATTACT
GACCGTCAAG TGACTGGTGT CACTCTGAGA AATGGTGAAG TACTGCATTC TAAACATGTT
ATTGCTGCGA TTGGTCACAG TGCCCGTGAT ACCTTCCAAA TGTTACATGA TAAAGGCGTG
TATATGCAGG CACAGTCATT TTCGATTGGC TTTCGTATTG AACACAAGCA AGAGATGATT
GATAAAGATC GCTTTGGCAT TAACGCTGGT CACCCAATGT TAGGTGCAGC AGATTATAAG
TTAGTCCACC ATTGCAAAAG TGGTCGCAGT GTTTACAGCT TTTGTATGTG CCCTGGTGGT
GTGGTTGTGG CGGCAACGTC TGAAGAACAT GCGGTAGTGA CTAATGGCAT GAGCCAATAT
TCGCGTAGTG AACGTAATGC CAACAGTGCC ATTGTGGTTG GGATTGATCC AAGTGATTTT
GACAACGATC CACTTCAAGG TATTGCGCTA CAACGTAAAT TGGAACGCCA CGCCTATATT
ATGGGAGGCA GCAATTACGA TGCTCCAGCG CAAATGGTCG GCGACTTTTT AGCTGCAGGC
GTTGGGAAAC CGTTTGAAAA CGTTGAGCCG TCTTATAAAC CCAACGTAAA AATGACCGAT
TTAAGCGATG CATTGCCGCA ATTCGCTATC GATGCTATTC GTGAAGCCAT TCCTGCATTT
GGTAAAAAAA TTCGTGGTTT TGACAGTAAA GATGCCATGT TAACCGGCGT TGAAACTCGT
ACCTCTTCAC CGGTACAAAT TAAACGTGGT GCCGATTTCC AAAGCATTAA CACCAAAGGT
TTATATCCTG CAGGTGAAGG TGCCGGTTAT GCTGGCGGGA TTTTATCGGC GGGTATTGAC
GGTATCAGTA TTGCAGAAGC CGTTGCATTA GACATGATTA AAGAAATGAC AAACAGTTAA
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| Protein sequence | MIRLNQVKLP LDHNEDALQQ LVLQRLSISA DQLVDIHVFK RGYDARKKNL ISLIYTLDVT
LANVDEAALL ASLADDHNIR VSPDTDYKYV ATAPEGLTER PLVIGMGPCG LFVGLMLAQM
GFKPIILERG KSVHERAKDT FRFWRTSELN TESNVQFGEG GAGTFSDGKL YSQVKDPGFK
GLKVKQEFVA AGAPAEIIYV SKPHIGTFKL VTMVEKMRRE IIRLGGEIRF ETRVDEINIT
DRQVTGVTLR NGEVLHSKHV IAAIGHSARD TFQMLHDKGV YMQAQSFSIG FRIEHKQEMI
DKDRFGINAG HPMLGAADYK LVHHCKSGRS VYSFCMCPGG VVVAATSEEH AVVTNGMSQY
SRSERNANSA IVVGIDPSDF DNDPLQGIAL QRKLERHAYI MGGSNYDAPA QMVGDFLAAG
VGKPFENVEP SYKPNVKMTD LSDALPQFAI DAIREAIPAF GKKIRGFDSK DAMLTGVETR
TSSPVQIKRG ADFQSINTKG LYPAGEGAGY AGGILSAGID GISIAEAVAL DMIKEMTNS
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