Gene Sfri_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1574 
Symbol 
ID4277966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1877264 
End bp1878136 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content44% 
IMG OID638134359 
Producthypothetical protein 
Protein accessionYP_750263 
Protein GI114562750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTGT TTGTAAAAGA TTTAACTGTT ATCGATTTCT CTTACCTTTG TCCTGTTCGT 
GGCATGGTTG GTGAAAGCTG GATTGTCGAT GTGCTATTAG ATGGCGGCCT AGATGAGCAA
AATATGGTGC TCGACTTTGG TAAGGTTAAA CGCATCATCA AAAACACCAT TGATGATGTA
GCCGATCATC GCTTGTTAAT CCCTACTGCT TGTAGCGAAG TGCGCTGGCA GCAAAAGGGC
GACCGAGTTT GGATGGATTT TAGCAGTGAA AAAGGCGACA TACATTTAGC ATGTCCTTCA
CAAGCATTTG CGCTTATTCC TACAGAAGTG ATTGACTACC AAAGCGTTAA TGACTTTTTG
AAGAAAGCCT TACGTGAAGT GTTACCTGAA AATGTCCAAG GCATCAGCCT CACATTGCGC
AACGAAGTGC TCGATACCCC ATTTTACCAT TACAGCCATG GATTACGTAA ACATGACGGT
AACTGTCAGC GTATTGCGCA TGGTCATCGT AGCCCGGTAA CCGTATTTGA AAATGGTATT
GCAGAGCCGA AATGGGACCA ATACTGGGCA GAACGTTGGC ATGATATTTA CCTCGGCACT
GAAGAAGACT TAGTGTCAGT GAAAACACTA GAGTTGTCGA AGCAGACTAA AATCAGCGAC
GAAACTCATT TTGGTTTTCA CTATGTTGCA CCTCAAGGTG ATTTTCAATT AGCGATGCCA
AAGCATTGCT GTGATTTAAT TCCTCACGAC ACCACTGTTG AGATGCTAGC TGAATACATG
GCCAAGACAT TGGCAAGTCA AGCGCCTGAA AGTCATTTTA AAGTTATCGC TTACGAAGGT
ATTGGCAAAG GGGCCATTGC GGTAAGAGGT TAA
 
Protein sequence
MQLFVKDLTV IDFSYLCPVR GMVGESWIVD VLLDGGLDEQ NMVLDFGKVK RIIKNTIDDV 
ADHRLLIPTA CSEVRWQQKG DRVWMDFSSE KGDIHLACPS QAFALIPTEV IDYQSVNDFL
KKALREVLPE NVQGISLTLR NEVLDTPFYH YSHGLRKHDG NCQRIAHGHR SPVTVFENGI
AEPKWDQYWA ERWHDIYLGT EEDLVSVKTL ELSKQTKISD ETHFGFHYVA PQGDFQLAMP
KHCCDLIPHD TTVEMLAEYM AKTLASQAPE SHFKVIAYEG IGKGAIAVRG