Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1573 |
Symbol | |
ID | 4277965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1875811 |
End bp | 1876515 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638134358 |
Product | two component transcriptional regulator, winged helix family protein |
Protein accession | YP_750262 |
Protein GI | 114562749 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTGGAC ATGTTCATCA ACAACCATTG ACCATATTAG TGGTGGAAGA CGAGCCTAAA ATAGCGCAGA TCTTAGTCGA CTTTTTAACC CTAGAAGGTT TTAACACCTT GGTACAACAC GACGGTCGTG ATGTGATTGA AACCATTAAG GCTCAACAAA TTGATTTTAT GATTCTAGAT TTGATGTTGC CCTATAAAGA CGGATTGACG ATTTGTCGTG AGTTGAGGCA ATTTTCAATG TTGCCAGTAT TAATGTTAAC GGCGCGGGTA GATGAAATTG ACCGTTTAAT GGGCTTAGAT ATCGGCGCAG ACGATTATGT GTGTAAGCCA TTTTCGGCTA GGGAAGTTGT TGCTCGGGTA AAAACGATTT TAAGGCGAGT CGAAAATACT CACGGCAGTC AAAGCGAGCA GGTTATTCGT TATAAGCATC TACAAATCAA TATCGAACGC TTTAAATGTC AGGTTGACCA ACAAGACGTA GAATTAACCC CAGTTGAATT TAGACTACTG CATACGCTGC TAAAACGGCC AGGCGTAGTG CACTCTCGAG ATAGCCTCAT GCAGGTGTGT TATGTCGACG ATCGTATTGT TAGTTCGCGT ACCATTGACA GTCATGTGAA GAATCTACGT CATAAGTTAA CCCAAGCCAG CCAACAAAAG GAGTTGCTGC ACTCCATTTA CGGTGTGGGT TATAAGGTAG AGTAA
|
Protein sequence | MSGHVHQQPL TILVVEDEPK IAQILVDFLT LEGFNTLVQH DGRDVIETIK AQQIDFMILD LMLPYKDGLT ICRELRQFSM LPVLMLTARV DEIDRLMGLD IGADDYVCKP FSAREVVARV KTILRRVENT HGSQSEQVIR YKHLQINIER FKCQVDQQDV ELTPVEFRLL HTLLKRPGVV HSRDSLMQVC YVDDRIVSSR TIDSHVKNLR HKLTQASQQK ELLHSIYGVG YKVE
|
| |