Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1572 |
Symbol | |
ID | 4277964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1874303 |
End bp | 1875808 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638134357 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_750261 |
Protein GI | 114562748 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTTTA TGCAAATATC TCAAAAGCTT TTCTTGGCCT TCGTTGGCCT TACCAGTATT GTACTTATCG CCACGTTATC GTTAGCGAGG TGGAGTTTTG ACCAAGGTTT TTTAGACTAT ATCAACGGAT TAGAACAAGA GCGTTTACAG CATTTATCGG ATGAGCTGTT GACACTTTAT GCTGCTAATC CTGAAGCGCA AACCGCTCCA TCAGTAATGA CAGATCAACA ATCTACACGA GTGTGGCAAT CGATTAATCA AACAACATTA ACACAAGCCA TTTCGCTTCA CGCTCCATTT CCAAAAAGAA ATAGACCCGG CGACGGGGCA AGACCGCCAA GACCTGCAGG TGATAATCGG CCTCCAATGG GACCTGATCG ACGTTTAGGT CCTCCAAGGC AACGGCCACC ATTTTCACCA CCTTCTGGTC CTCCGACGGG GTTATATTCT GCTGAACAAC AGTTTATTAG CGGCGTTGAT ATTGGCAATG TGGATAATCG GATTAGCTTA ACCTTGTTAT TCAATGACCA TATTGTGGGC TATTTATACA GTAGCCCTAT TCGTGAAGTT GAATCTTCTT CAGCTACCGC ATTTTCTCAG CAACAACGTT GGACCAGTGT CGGGATCGGT TTATTGTGTT TACTGCTTGC AAGTGCAATT GCTTGGTGGT TATCACGTTT TCTACTGATC CCAGTCAAAC AAGTTATGCT GGGTGTATCG TATTTATCTC AAGGTAATTA TGATGAACGT TTATCACCTC AGCGTGCAGA TGAGTTGGGG CAATTAATGG CCAATATTGA TCATCTCGCC ATGACGCTAT CGAAAAACCG CAGTGCTAAA AATCGTTGGT TAGCTGATAT TTCTCATGAA CTGCGCACGC CATTGAGTAT TTTATGTGGT GAGATTGATG CGATTAAAGC AGGGATCAGA ACGTTCGATA GCACTCAGCT TAACTCACTT GAACAAGAAG TGCTGCGTAT GAAGCACTTA GTCGATGATT TGTATGAACT GTCTTTATCT GATGTTGGTG GCTTACGTTA TCATTTCCAA CGAGTGAACG TCAGTGAGTC ATTACAGAGC ACGCTTAACA GTATGGCTAC CAGCCTAGAA GAGAAAGGCC TAACACTACA AAGTCAGTTC CAGCCTGAGG TGTATTTATC TGCCGATGTA CTTCGTCTTG AACAGCTATT TATTAATTTA CTAATGAATT CTATGGCTTA CACAGACAGT CCTGGGGTAA TTGATGTGCG ATTGTCACAA CAAGCTAAAA CAGTAATATT AACCATCAAT GATACTAAGC CCAGTGCCAG CATTGAAGAG TGTGAACACT TGTTTGAGCC ATTATACCGT CAAGACAGTG CCCGCACACG TCGTGGTAGT GGTGCTGGTC TTGGTTTAAC CATCTGTAAG AATATTGTCG AAGCGCATGA TGGCACCATT AAGGCCATCC CATCACCATT GGGTGGGCTT TGTATTGAAG TACAATTACC TATGCACAGG GAATGA
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Protein sequence | MYFMQISQKL FLAFVGLTSI VLIATLSLAR WSFDQGFLDY INGLEQERLQ HLSDELLTLY AANPEAQTAP SVMTDQQSTR VWQSINQTTL TQAISLHAPF PKRNRPGDGA RPPRPAGDNR PPMGPDRRLG PPRQRPPFSP PSGPPTGLYS AEQQFISGVD IGNVDNRISL TLLFNDHIVG YLYSSPIREV ESSSATAFSQ QQRWTSVGIG LLCLLLASAI AWWLSRFLLI PVKQVMLGVS YLSQGNYDER LSPQRADELG QLMANIDHLA MTLSKNRSAK NRWLADISHE LRTPLSILCG EIDAIKAGIR TFDSTQLNSL EQEVLRMKHL VDDLYELSLS DVGGLRYHFQ RVNVSESLQS TLNSMATSLE EKGLTLQSQF QPEVYLSADV LRLEQLFINL LMNSMAYTDS PGVIDVRLSQ QAKTVILTIN DTKPSASIEE CEHLFEPLYR QDSARTRRGS GAGLGLTICK NIVEAHDGTI KAIPSPLGGL CIEVQLPMHR E
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