| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1568 |
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| Symbol | |
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| ID | 4277804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1869414 |
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| End bp | 1870277 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134353 |
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| Product | heat shock protein HtpX |
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| Protein accession | YP_750257 |
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| Protein GI | 114562744 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0501] Zn-dependent protease with chaperone function |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.118191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGTA TATTTTTGTT GATTGCAACC AACTTTGCCA TCTTACTGGT TGCCTCAATT
GTAATGTCTA TTCTTGGGGT TAATACCTCA ACGATGGGTG GACTGTTAGT ATTTGCTGCC
ATTTTTGGTT TTGGTGGCTC GTTTATCAGT TTAGCCATTT CAAAATGGAT GGCTAAGAAA
ACCATGGGTT GTGAAGTTAT CACTCAACCA CGTGACAGTA TGGAACGTTG GTTAGTCGAA
ACGGTTGCAC GCCAAGCTGA AAAGTCTGGT ATTAAGATGC CAGAAGTGGC TATATACCAG
TCGCCAGAAA TGAACGCATT TGCAACCGGT CCAAGTAAAA ATAATGCCCT TGTTGCTGTG
AGTTCTGGTT TGCTTTACGG CATGACCCAA GATGAAATTG AAGGCGTACT TGCCCATGAA
GTGAGCCACG TGGCAAACGG TGACATGGTG ACATTAACCT TAATCCAAGG TGTGGTGAAT
ACCTTTGTTA TTTTTGCTGC ACGCGTTGTT GCTGGTATTA TTAACAATTT TGTTTCCAGT
AATGATGAAG AAGGTGAAGG CCTAGGTATG TTCGCGTACA TGGCCGTAGT ATTTGTGCTT
GATATGTTAT TTGGTATTTT GGCATCAATG ATAGTGGCTT ACTTTTCACG TATTCGTGAG
TTTAAAGCTG ATGAAGGCGC GGCACGTTTA GCAGGCAAAA ATAAAATGAT TGCCGCATTA
GAACGATTAC GTCAAGGCCC TGAATCCGGT GCAATGCCAG CGCAAATGTC AGCCTTTGGT
ATTAATGGTA AACGTTCAAT TGCTGAGTTA ATGATGAGCC ATCCGCCACT AGAGAAGCGC
ATCGCTGCAC TAAAAAATAG CTAG
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| Protein sequence | MKRIFLLIAT NFAILLVASI VMSILGVNTS TMGGLLVFAA IFGFGGSFIS LAISKWMAKK
TMGCEVITQP RDSMERWLVE TVARQAEKSG IKMPEVAIYQ SPEMNAFATG PSKNNALVAV
SSGLLYGMTQ DEIEGVLAHE VSHVANGDMV TLTLIQGVVN TFVIFAARVV AGIINNFVSS
NDEEGEGLGM FAYMAVVFVL DMLFGILASM IVAYFSRIRE FKADEGAARL AGKNKMIAAL
ERLRQGPESG AMPAQMSAFG INGKRSIAEL MMSHPPLEKR IAALKNS
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