| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1561 |
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| Symbol | |
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| ID | 4277797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1862207 |
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| End bp | 1864963 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134346 |
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| Product | ABC transporter related |
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| Protein accession | YP_750250 |
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| Protein GI | 114562737 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCAAC AAAATTATCC TATCGTCTGC ATTAAGGGTG TTACGCATAC CTATAAGAAA
GTGAATGCTA TCGAAGATGT GTCATTAACC ATTCCATCTG GGATGATGGT TGGCTTACTC
GGTCCTGATG GTGTTGGTAA GTCGACGCTA TTGGCCCTTA TTTCGGGTGT TCGCAAGTTA
CAGCATGGCA GTCTTGAGGT GCTTGGTGGT GACATGGCTT CGGCCCGCCA CCGCTCCGAA
GTTGGCCCTC GGATTGCCTA CATGCCCCAA GGTCTGGGTA AAAACCTTTA TAGCGAGCTT
AGTGTTGCCG AAAACCTGGA CTTCTTTGGA AAGTTATTTG GTCAGGGGGT CTCTGAGCGT
AAAGCTCGAA TCGATCGTTT GACTAAAGCA ACAGGGCTTC ACTCTTTTCT ATCAAGGCCA
GCGGGCAAGT TATCTGGTGG CATGAAACAA AAACTTGGGC TCTGCTGTTC GCTTATACAT
GATCCAGATC TGTTGATATT GGATGAGCCG ACGACTGGTG TCGACCCATT GTCAAGGCGA
CAATTTTGGC AATTAATCAA CGCTATTCGC AGCGAAAGAC CCAGCATGAG TGTGATAGTG
TCCACTGCGT ACATGGACGA AGCAGAAGAC TTTGACTGGC TGGTTGCAAT AGATGCTGGA
CATATCTTGG ACACAGGTAC TCCAGCAGAG CTAAAAGCCA AAACTAACAC CAGTAATTTA
GAAAAGACGT TTGTGCGCTT ACTACCGGAA GGGAAGCGGG GAAGTGGTAA AGAGCTTGTT
ATCCCTCCAT TTGAAAAGAC TGCTGGCACA CCTGCTATCA TAGCGAAAGG GTTGACTCGA
TGCTTCGGTG ATTTTACCGC TGTGAACGAC GTTAGTTTTG AAATTCAAGC TGGCGAGATT
TTTGGTTTTC TCGGTTCTAA TGGTTGTGGC AAGACCACCA CAATGAAAAT GCTGACGGGT
TTGCTGCCAG CTTCTGAAGG TGAGGCTTTT TTATTCGGAA AGTTAGTTGA TGCGAACAAT
CTAGAAATGC GCAAGCGTGT CGGATTTATG TCACAAGCTT TTTCGCTGTA TGGCGAACTA
ACGGTGATGC AGAATTTAAC CTTGCATGCT CGCTTATTTC ATCTGTCACC GTCAAAAACA
ACAGAGCGGA TAAATACGCT GGTTGACCGT TTTGGTCTGC GCAAACAAAT AGATGATCTA
GCTTCATCGC TGCCACTTGG CATCCGTCAG CGGCTTTCGC TCGCGGTTGC GGTGATCCAT
GAGCCCGAAA TGCTCATTCT TGACGAGCCT ACTTCAGGTG TTGATCCTGT CGCCCGTGAC
GAATTTTGGG AGCTGCTTGT TGAATTGTCA CGTCGAGATA AAGTGACCAT ATTTATTTCT
ACCCATTTTA TGAATGAGGC TTTACGTTGC GATCGCATTT CGCTCATGCA CGCTGGTGAA
GTACTTGTTT ATGATGAACC GCAACATCTA GTAGAAGCCA AAGGTGCAGC CTCGCTCGAG
GAAGCATTTA TCAATTACCT GAAAGAGGCC ATTGGAACGA CTGCCGAAGA ATCAACCGAT
TTGGCTTCCG TGCAGCCAGA CGATTCATCA ACGTTAATAA GTTCACCTTC AACCACATTA
AAACGCCACT ATTTTAGCTT GAATAGGTTA TTGGCATACA GCTATCTTGA AATGATGGCG
GTAATGCGTG ACAGGATACG TTTGGCATTT GCCTTTTTTG GCAGTGTGAT CTTATTAATT
GTTATTGCTT ACGGTATATC GCTAGATATA GAGGATCTCA CTTTTGCCGT GCTGGATCTG
GATCGTACTC CAGAGAGCCG CCAATATTTA AGTAACTTTC AAGGGTCACA CTATTTTATT
GAGAGACCAG AACTGCAAAG TAAAGATGAA CTTGAATGGC GTCTTAAGTC TAACGATATA
ACCTTAGCGA TAGAGATCCC TCCGGGCTTT GGCCGTGATT TAAAAACGGG CCAAACGCCT
AGTATTTCTG CTTGGATTGA TGGTGCTAAT ACCACCAGAG CAAGCACTAT AGAAGGATAT
GTCACTGGTG GCCATATACG CTATCTTACC GAGTTAGCAA CAAATGCAGG TATCGACGCA
AGAGCTCTAT ATAAAGTAGA TCTACAGTCT CGATATCGTT ATAACCCATC ATTTGAGAGC
ATATTTTCGA TTGGGCCGAA AACGCCTGCC TTGCTGTTGC TCTTTTTCCC CGCAATCTTG
ATGGCGGTGA GTATCTCGCG TGAGAAGGAG GTTGGCACTA TCACCAACTT TTACGTCACG
CCAACAAACA AACTTGAATT TCTGATAGGC AAACAGCTGC CTTATATTGG CATTGGCATG
GCTAACTTTT TTATTCTGAC ATTCTTAGTG GTATTTTTGC TACAAGTACC GCTAAAAGGT
AGCCTGCTGG GCTTAACTGT GGGAGCTTTC TTTTACGTTT GCGCTTCAAC GGGTATTGGG
TTAATTGTTT CCGCGTTAAC TAAGACACAG GTTACCGCTG TTTTTGCGAC TACAATTGTG
TCTTTATTAC CCACAGCACT TTTCTCCGGG TTAGTTCAGC CAACATCAAC GTTAGAAGGC
GGGGGATATC TTATCGGTAT GGCGTGGCCC GCAACCTATT ACATGCATTT GAGTGTCGCT
GCATTTACCA AAGGATTGGA TTTCTTTGCC CTAGCAGGGG ATTTAATGAT GCTATCCATT
TATGGTCCGC TCTTTGTCGT TTTCGCTGCA GTATGTTTGA CAAAACAAGA GGCATAA
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| Protein sequence | MDQQNYPIVC IKGVTHTYKK VNAIEDVSLT IPSGMMVGLL GPDGVGKSTL LALISGVRKL
QHGSLEVLGG DMASARHRSE VGPRIAYMPQ GLGKNLYSEL SVAENLDFFG KLFGQGVSER
KARIDRLTKA TGLHSFLSRP AGKLSGGMKQ KLGLCCSLIH DPDLLILDEP TTGVDPLSRR
QFWQLINAIR SERPSMSVIV STAYMDEAED FDWLVAIDAG HILDTGTPAE LKAKTNTSNL
EKTFVRLLPE GKRGSGKELV IPPFEKTAGT PAIIAKGLTR CFGDFTAVND VSFEIQAGEI
FGFLGSNGCG KTTTMKMLTG LLPASEGEAF LFGKLVDANN LEMRKRVGFM SQAFSLYGEL
TVMQNLTLHA RLFHLSPSKT TERINTLVDR FGLRKQIDDL ASSLPLGIRQ RLSLAVAVIH
EPEMLILDEP TSGVDPVARD EFWELLVELS RRDKVTIFIS THFMNEALRC DRISLMHAGE
VLVYDEPQHL VEAKGAASLE EAFINYLKEA IGTTAEESTD LASVQPDDSS TLISSPSTTL
KRHYFSLNRL LAYSYLEMMA VMRDRIRLAF AFFGSVILLI VIAYGISLDI EDLTFAVLDL
DRTPESRQYL SNFQGSHYFI ERPELQSKDE LEWRLKSNDI TLAIEIPPGF GRDLKTGQTP
SISAWIDGAN TTRASTIEGY VTGGHIRYLT ELATNAGIDA RALYKVDLQS RYRYNPSFES
IFSIGPKTPA LLLLFFPAIL MAVSISREKE VGTITNFYVT PTNKLEFLIG KQLPYIGIGM
ANFFILTFLV VFLLQVPLKG SLLGLTVGAF FYVCASTGIG LIVSALTKTQ VTAVFATTIV
SLLPTALFSG LVQPTSTLEG GGYLIGMAWP ATYYMHLSVA AFTKGLDFFA LAGDLMMLSI
YGPLFVVFAA VCLTKQEA
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