Gene Sfri_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1559 
Symbol 
ID4277795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1859695 
End bp1860228 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content45% 
IMG OID638134344 
ProductISSod10, transposase OrfB 
Protein accessionYP_750248 
Protein GI114562735 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGTTAG ATCGCATTGA TGTTTGGTTT CAAGATGAAG CTAGATTTGG TCAGCAAAAT 
ACCACGACCC GCATTTGGGC AACGAAAGGA ACCCGACCAC GAGCGGTAAG GCAACAACAG
TTCGAATCAG CATATTTATA TGGTGCGGTG TGTCCTGCAA CAGGCACGAC AGAGGCTATT
ATTGCCCCGC ATGCCAACAG TGAATATATG TGGGAGCATT TAAAATTAAT TTCAGAGGCT
ACCGAATCGG GTCGCCATGC TTTGGTCATC ATGGATGGTG CAGGTTGGCA TCAACAAGAT
CTGACTGAGG ACTTTGATAA CCTTAGTATC CTTAAGCTTC CGCCCTATTC GCCAGAACTC
AACCCTATAG AACAAGTGTG GCAATGGCTT CGTCAGAATG AACTCGCAAA TCGTTGCTTT
AGTGGATATG ACGATATTGT TGAGCAGTGT TCCATTGCAT GGAATCGATT TATTGCAGAG
CCGGAAAGGG TGATTCAACT ATGTTCTAGA CGGTGGACAA AATTGACCAA TTAA
 
Protein sequence
MALDRIDVWF QDEARFGQQN TTTRIWATKG TRPRAVRQQQ FESAYLYGAV CPATGTTEAI 
IAPHANSEYM WEHLKLISEA TESGRHALVI MDGAGWHQQD LTEDFDNLSI LKLPPYSPEL
NPIEQVWQWL RQNELANRCF SGYDDIVEQC SIAWNRFIAE PERVIQLCSR RWTKLTN