Gene Sfri_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1558 
Symbol 
ID4277794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1859202 
End bp1859681 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content40% 
IMG OID638134343 
ProductISSod10, transposase OrfA 
Protein accessionYP_750247 
Protein GI114562734 
COG category[L] Replication, recombination and repair 
COG ID[COG3415] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATC TCAATCTTGC AGCATTAGTT AAATCTGAGA AACGCGCACG TAAACGTATG 
CGTTATCTCG CCTTACTTCA TTTTACCGAA GGTCATTCTC GTACTGCTAT AGCCAACATG 
CTGAAGGTCA GTAGAACCAG TGTAACTACT TGGGTTACTC ATTATTTAAC TCATGGCATT 
AGCGGCCTAG ATGATAAACA TAATCCAGGT AGACCCGCTC AACTATCGGC GAAACAACTG 
GTAAATCTGA AAGAATTTGT ACAACGTCAA AGCTTGTCTG AGAGTGGCGG AAGATTGATG 
GCAAGAGATG TCAGTCTTTT TATTCAGTCT GAATTTGGGG TGACCTTTAA ACAGGCAAAT 
ATCTACAGAT TACTGCATCA ATTAGGATTG TCATGGATAA CGACCCGTTC TCGACACCCA 
AAACAATCTC AAGATATTCA GGACGCTTTT AAAAAACTTC CAGCTGTCAA CGATCCTTAA
 
Protein sequence
MNNLNLAALV KSEKRARKRM RYLALLHFTE GHSRTAIANM LKVSRTSVTT WVTHYLTHGI 
SGLDDKHNPG RPAQLSAKQL VNLKEFVQRQ SLSESGGRLM ARDVSLFIQS EFGVTFKQAN 
IYRLLHQLGL SWITTRSRHP KQSQDIQDAF KKLPAVNDP