Gene Sfri_1557 details

Gene Information

• Locus tag: Sfri_1557
• ID: 4277793
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1858569
• End bp: 1859102
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638134342
• Product: ISSod10, transposase OrfB
• Protein accession: YP_750246
• Protein GI: 114562733

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCGTTAG ATCGCATTGA TGTTTGGTTT CAAGATGAAG CCAGATTTGG TCAGCAAAAT 
ACCACGACCC GCATTTGGGC AACGAAAGGA ACCCGACCAC GAGCGGTAAG GCAACAACAG 
TTCGAATCAG CATATTTATA TGGTGCGGTG TGTCCTGCAA CGGGCACGAC AGAGGCTATT 
ATTGCCCCGC ATGCCAACAG TGAATATATG TGGGAGCATT TAAAATTAAT TTCAGAGGCT 
ACCGAATCGG GTCGCCATGC TTTGGTCATC ATGGATGGTG CAGGTTGGCA TCAACAAGAT 
CTGACTGAGG ACTTTGATAA CCTTAGTATC CTTAAGCTTC CGCCCTATTC GCCAGAACTC 
AACCCTATAG AACAAGTGTG GCAATGGCTT CGTCAGAATG AACTCGCAAA TCGTTGCTTT 
AGTGGATATG ACGATATTGT TGAGCAGTGT TCCATTGCAT GGAATCGATT TATTGCAGAG 
CCGGAAAGGG TGATTCAACT ATGTTCTAGA CGTTGGACAA AATTGACCAA TTAA 

 

Protein sequence

MALDRIDVWF QDEARFGQQN TTTRIWATKG TRPRAVRQQQ FESAYLYGAV CPATGTTEAI 
IAPHANSEYM WEHLKLISEA TESGRHALVI MDGAGWHQQD LTEDFDNLSI LKLPPYSPEL 
NPIEQVWQWL RQNELANRCF SGYDDIVEQC SIAWNRFIAE PERVIQLCSR RWTKLTN