| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1554 |
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| Symbol | |
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| ID | 4277790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1855982 |
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| End bp | 1857541 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134339 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_750243 |
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| Protein GI | 114562730 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAGAA TGACCATGCC AACGGCACCT ATTTCAATGC GTAAACTCAA AGAAATTTTA
AGACTAAAAT ACGGCTGTAA ACTCAGTCAT CGTCAGATAG CAAAAAGCTT ATCTGTTTCA
CCCTCAATCG TGTCTAAATA TGCCTGTAAA TCAGCAGAGC TAGACATTAC TTGCTGGCCG
CTTGATGAGA AGTGGGATGA TAACTCTCTA CAACAAGCGT TTTTCAAAAC AAAGCCTCGT
TTAAAAGGCT TTACCATTCC TGACTGGTCG TTAGTTCAAC AAGAGCTTCG GCCTAAAACC
ATGACGTTGT TGCTGCTTTG GGAAGAATAC AAAGAGCGGC ACGCGGAAGG TTTTTACAGT
TACACTCACT TCTGCCGTCA GTACAAGGCA TGGCTTAAAT GCCAAAAACC CTCGATGCGA
CAAAACCATA AAGCTGGTGA AAAACTGTTT GTGGATTACT GTGGCCCAAC CATGAGTATT
GTTGATAGAA GTACAGGCGA ATGCCGTACT GCACAAGTAT TCGTCGCGGT CATGGGGGCA
TCAAATTATA CCTATGCCGA AGCGACTTAC AGCCAGAAAC TTGAAGATTG GGTGATGAGT
CATGCCCGTT GTTTTGAGTT TCTTGGTGGT GTTCCTGAGC AGATCATTCC TGACAACCTT
AAAAGTGCCG TCACCAAACC CTGCCGATAT GAGCCTGACT TAAACCCAAC CTACCAACAA
CTAGCGACGC ATTACGATAC CGTCATTGTG CCTGCAAGAC CCTATAAACC AAAGGATAAA
GCCAAGGCTG AAGTGGGTGT ACAAATTGTT GAACGTTGGA TCATGGCACG TCTTCGTAAT
GAAACCTTTT TTAGCTTGCG TCAATTAAAT CTAAAGATTC AAGAATTACT CATCGATTTA
AATCAGCGAC AAATGAAAAA ACATCCTGGC TCACGATTAA GTCAATTTGA AGCCATTGAT
AAACCAGCGT TAAAACCATT GCCCTTGCAG CCTTACAGCT ACACCTTAGT GAAACAAGTG
AGAGTACATA TTGATTATCA TATTGAGATT GAAAAGCACT ATTACTCAGT GCCACATACC
TTGATCAAGC AAAAACTTGA AGCACATGCC TCAGGAAAAT TGGTGACACT CTACCATCAA
GGCATACGAG TCGCTGTTCA CCCCAGATCA TACCGAGAAG GTGCGCATAC AACACTTGAG
CTACATATGC CTATCGCTCA CCAAAAACAA CAGCAATGGA CACCGCAGCG ATTTGAGCGC
TGGGCAAGTC AGTTTGGTAA ATCAACCGAG CAGTTTGTTA TGCAATTGAT GCAAGCTAAA
AAGCATCCAG AGCAAAGCTA CCGTGCTTGT ATGGGGTTAT TAAGCCTAGG CAAGAAGTTT
ACAGACCAAC GTCTTGAAGC CGCCTGTCAT CGCGCATTAG CCACAGGTGT TACTCGCGTA
AAACAAGTGA AAACCATCTT AGAAAAAGGC TTGGATAAGC AACCCTTGCC ACAAGCTCAG
GGTGATTCGC TACAAGATAT TGATCATAAA AATATCCGCG GCAATAACTA TTACCATTAA
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| Protein sequence | MMRMTMPTAP ISMRKLKEIL RLKYGCKLSH RQIAKSLSVS PSIVSKYACK SAELDITCWP
LDEKWDDNSL QQAFFKTKPR LKGFTIPDWS LVQQELRPKT MTLLLLWEEY KERHAEGFYS
YTHFCRQYKA WLKCQKPSMR QNHKAGEKLF VDYCGPTMSI VDRSTGECRT AQVFVAVMGA
SNYTYAEATY SQKLEDWVMS HARCFEFLGG VPEQIIPDNL KSAVTKPCRY EPDLNPTYQQ
LATHYDTVIV PARPYKPKDK AKAEVGVQIV ERWIMARLRN ETFFSLRQLN LKIQELLIDL
NQRQMKKHPG SRLSQFEAID KPALKPLPLQ PYSYTLVKQV RVHIDYHIEI EKHYYSVPHT
LIKQKLEAHA SGKLVTLYHQ GIRVAVHPRS YREGAHTTLE LHMPIAHQKQ QQWTPQRFER
WASQFGKSTE QFVMQLMQAK KHPEQSYRAC MGLLSLGKKF TDQRLEAACH RALATGVTRV
KQVKTILEKG LDKQPLPQAQ GDSLQDIDHK NIRGNNYYH
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