| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1552 |
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| Symbol | |
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| ID | 4277788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1848215 |
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| End bp | 1848775 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134332 |
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| Product | D,D-heptose 1,7-bisphosphate phosphatase |
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| Protein accession | YP_750241 |
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| Protein GI | 114562728 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
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| TIGRFAM ID | [TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000757194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAATAAAG CAGTATTTCT CGATCGTGAT GGTGTGATCA ATAAAGACAA TGGTTATGTT
CATACCGTGG ACGACTTTGA ATATATCGAC GGTGTATTTG AAGCGTGTCT CGCATTAAAG
CAGATGGGTT ACCTATTAAT AGTGGTGACC AATCAATCTG GCATTGCTCG TGGTATGTAC
AGTGAGGATG ATTTTCATCA TTTAACGGAA TGGATGGATT GGAACTTTGC CGATAAAGGT
GTCGAACTTG ATGGTATCTA CTATTGCCCG CATCATCCAC AAAAAGGCCT AGGTGAATAT
AAGCAAGATT GCGATTGCAG AAAGCCCAAA CCCGGCATGA TGCTAGATGC TGCAGAATTT
TTGAAAATTG ATATGAGCCA GTCAGTCATG GTGGGCGATA AAGCTGATGA TATACGCGCA
GCAAAAGCGG CTGGCATTAA CACTGCCATT TTGGTTCGTT CAGGTAAAGT AGTAGATGAA
GCCGGAATTG AACTTGCGAG TGCAGTTGTT GACAGTATCG CTGATGTTCC GAGTCTGCTA
AGTCAATTAC TCGCCAAATA A
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| Protein sequence | MNKAVFLDRD GVINKDNGYV HTVDDFEYID GVFEACLALK QMGYLLIVVT NQSGIARGMY
SEDDFHHLTE WMDWNFADKG VELDGIYYCP HHPQKGLGEY KQDCDCRKPK PGMMLDAAEF
LKIDMSQSVM VGDKADDIRA AKAAGINTAI LVRSGKVVDE AGIELASAVV DSIADVPSLL
SQLLAK
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