Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1550 |
Symbol | |
ID | 4277786 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 1846137 |
End bp | 1847219 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638134330 |
Product | 3-oxoacyl-(acyl carrier protein) synthase III |
Protein accession | YP_750239 |
Protein GI | 114562726 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
TIGRFAM ID | [TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.110093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTATG CACACATTAC CGGTTGGGGT AAGTCAGTTC CACCCGCAAC ATTGACCAAT GACGATTTAG CGACATTCAT GGAAACGACA GATGAATGGA TCAAAACACG TACTGGAATT AGTAAGCGTA ACATTAGTCA CGTTAATACT TCTGAAATGG CTTCGGTTGC CGCTAAGCAT GCGCTTGCCG CAGCAGGGAT TGATGGCAGT GAATTAGATT TAATTATTCT AGCCACCGCC AGCCCTGATA CCTTGATCCC CAATATTGCA TCAACGGTAC AGGCAAATAT TGGTGCTACT TGTGGTGCAT TTGACATTAA CGCTGCTTGC AGTGGCTTTT TGTATGGTGT TGGCTTGGCC AGCTCAATGA TTAAGAGCGG CCAAAGTAAG AAGATTCTGA TTATCGGCGC TGAACGTTTA TCTTTTTATT TGGATTGGTC TCGACGTGAA ACAGCAGTGT TATTTGGTGA CGGCGCTGGT GCAGTTGTAC TTGAGGCCAG TGACCAACCT GGTGGTGTAT TAGGTTATGA ATTAAATAAC GATCCTGAAG GTCGCGATAT TTTAAAGTCT AACTTTGGCA CCCAGATGGA TAGATTTGAC AATGACTCAT TGGATTTTTA CATTCATATC AATGGTCAAG ATGTGTTTAA ACGTGCAATT CATGGCATGG GAAGTTTAAG TAATAAGGTA TTAGACAACT GTGGTATCAG CATCGACGAT GTCGACTTTG TTATTCCACA TCAGGCAAAC GAACGTATTA TTGATACGCT AGTTAGCCGA ATGAAAATTC CAAAAGAAAA AGCCTTCGTC AATATCGCTG ATTATGGCAA TACGTCTGCA GCGACTATCC CGATTGCGAT TTGCGATGCG TTATCTCAAG GTAGAATTGA AGCCAATCAG ACTATTCTGT CTTGCGCGTT TGGTGCTGGA TTAACCTCAG CGGCCTTACT GCTAAAATGG GGCGAACGCA CCACGCCAAT TAACACCAGT GATGCTGCAT TACCGCCTTG CGATAAAACC GCACTTGAAT TGATTAAACC TGCAGTTGAT TATTTTTTCA ATAAAGCTAA AAACGCAGAA TAA
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Protein sequence | MQYAHITGWG KSVPPATLTN DDLATFMETT DEWIKTRTGI SKRNISHVNT SEMASVAAKH ALAAAGIDGS ELDLIILATA SPDTLIPNIA STVQANIGAT CGAFDINAAC SGFLYGVGLA SSMIKSGQSK KILIIGAERL SFYLDWSRRE TAVLFGDGAG AVVLEASDQP GGVLGYELNN DPEGRDILKS NFGTQMDRFD NDSLDFYIHI NGQDVFKRAI HGMGSLSNKV LDNCGISIDD VDFVIPHQAN ERIIDTLVSR MKIPKEKAFV NIADYGNTSA ATIPIAICDA LSQGRIEANQ TILSCAFGAG LTSAALLLKW GERTTPINTS DAALPPCDKT ALELIKPAVD YFFNKAKNAE
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