| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1544 |
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| Symbol | |
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| ID | 4277780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1837400 |
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| End bp | 1838899 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134324 |
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| Product | lysophospholipase-like protein |
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| Protein accession | YP_750233 |
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| Protein GI | 114562720 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.7787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCAA TTGTGATTGG ATCGACGAAA CATTTTTTAT TTGCCGCATT TTATGGTGCT
CTAGGTATTG GTTTAGCGTT AATCATTACC GCCGTTTGGT TGCTGAATGC ACGGCCTAAC
TTATCATTAT GGCACACGAC GCACCTTACC TCAGAGTACC ATCAACAGTC CGGTTTAACT
GATTTTAGCC AATATTTACA GTTAGAAGAT AAGCTTTTTG CTGAGGTAGA GCAGCAAGTT
TACCGTCAAT ATCAACCTGA AATAGCATCC CCGGTTAATC GTTATGAGCG TAATAGTTTA
TCTGATCCTG GATTATGGCA ACAAAATTGG AACCGTTCTT TCGAATGGAA AAATCCCCAA
GCTGAGTTTG GCCTTTTATT GCTACACGGT ATGTCCGACT CACCTTATGT GATGTCGCAT
TTTGCACAGC ATTATCAGCA CCAGGCTTAT GTTTTAGGGT TGCGCTTGCC AGGGCACGGT
ACCATTCCTT CTGGATTAAC CGACATTACT TGGCCTGATC TTGCTGGGGC TGTATCACTA
GCTGTTGCCC GCTTGTCTGC CCAATTACCA GGTAAACCCA TTTATGTGGC CGGTTTTTCG
ACTGGAGCTG CTTTAGCATT AAACCATGAA CTTGAAAATA TCAGCTTAAA CAAGCCTACA
AGCTTTGCCG GCATGATTAT GTTATCACCA GCCATTGGTC TAGCTCCCAT TGCGGCAGGC
GCTTATTGGC AAGCTAAGCT GGGTAAGTTG CTCGGGCAAG ATAAACTGTA TTGGAACAGC
ATTCAAACAG AATATGATCC ATTTAAATAT CGTTCGTTTG CTGTTAATGC TGGCGATGTT
GTGTATCAGT TAACACAGCG TAATCAGACC TTATTAGCAT CATTGTCGGC GCAGCAATTT
AATGCCATTC CTGCAATGCT AACGTTTCAG TCAGTTGTCG ATGATACTGT TTCTTCGTTA
GCTGTGGTTG ATTTGCTATA TCAAAAATTG CCAATAAATA AAGGCCATCA ATTAGTGCTA
TTTGATGTCA ATAGGACGAA GAGTAACAAC CAATTACTTT TCCAAGATCC ATTGGCGACT
TTTGCCCCTT TTTGGTTACC AAAGCAATTA CCTTATCGCT TAAGTTTGGT TGAAAATGAT
CCGCAACAAG ATAATCATGT TCAGGTTAGG GAGCTTGCTG ATAAATCGAA GACCGACGAT
GTGATAGCGC TAAGTTTGAC TTGGCCGAAT GATGTATATT CTTTATCTCA TGTGGCGCTA
AACTTTCCGA TTGAAGACAG CCTTTATGGG CCTCTACCAA GTAATGACCC TGATAAAATC
CAAATAGGCA GAGCAATTTA TCAAGGTGAA CGAGGCATTT TCAGTGTGAC TGCTGATGAC
ATGTTACGTC AGAAATGGAA TCCATTTTAT CCTTACATGA TGACTCGAAT TGATGAGTTT
ACTCAAGGGT ATCAACCTGA GTCACCATTA GGCAATAAAC CGCTAAATAT TAGTCATTAA
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| Protein sequence | MRAIVIGSTK HFLFAAFYGA LGIGLALIIT AVWLLNARPN LSLWHTTHLT SEYHQQSGLT
DFSQYLQLED KLFAEVEQQV YRQYQPEIAS PVNRYERNSL SDPGLWQQNW NRSFEWKNPQ
AEFGLLLLHG MSDSPYVMSH FAQHYQHQAY VLGLRLPGHG TIPSGLTDIT WPDLAGAVSL
AVARLSAQLP GKPIYVAGFS TGAALALNHE LENISLNKPT SFAGMIMLSP AIGLAPIAAG
AYWQAKLGKL LGQDKLYWNS IQTEYDPFKY RSFAVNAGDV VYQLTQRNQT LLASLSAQQF
NAIPAMLTFQ SVVDDTVSSL AVVDLLYQKL PINKGHQLVL FDVNRTKSNN QLLFQDPLAT
FAPFWLPKQL PYRLSLVEND PQQDNHVQVR ELADKSKTDD VIALSLTWPN DVYSLSHVAL
NFPIEDSLYG PLPSNDPDKI QIGRAIYQGE RGIFSVTADD MLRQKWNPFY PYMMTRIDEF
TQGYQPESPL GNKPLNISH
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