Gene Sfri_1541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1541 
Symbol 
ID4277777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1834479 
End bp1835783 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content43% 
IMG OID638134321 
Productinosine kinase 
Protein accessionYP_750230 
Protein GI114562717 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.209586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTC CTGGTCAACG TAAGTCCAAA CACTATTTCC CTGTAAACAG TCGTGATCCG 
TTATTGGCTC AACTTACGCA GCAGCCTCAA CCTTTTTCTA CTTACATTTG CGGTATAGAT
CAAACCTTGG TTGATATCGA GGCTAAAGTA GAAGACGAGT TACTTGAGCG ATATGGCTTA
CCTAAAGGCA ACTCAACTCT CATTAATGAT GAGCAAGCCC ATAATTTGTA CCATGAACTT
AAATCCAATG AGATGATCAG CGACGAATTT GCCGGTGGCA CCATTGGTAA CACCGTGCAT
AATTATTCGA TTTTAGCCGA TGATCGCTCA GTACTTTTTG GGGTTATGAG CCAACATATT
ATGGTGGGTA GCTATGCATA TCGCTATTTA TGTAACACTT CCTCAAAGGT TGATCTTAAC
TTTTTACAGC CTGTCGATGG TCCTATTGGT CGTTGTTTTA CGTTAATTTC TGACTGTGGC
GAGCGCACGT TTGCTATCAG TAAAGGCGCG ATGGATAAGC TAACACCTGA GTATATCGAT
AAAGAGGTGG TACAAGGCAG TTCGGCGTTA GTGTTAACGG CATATCTGAT GCGAGCAAGC
GAAGGTGATG GTATTACAGA TGCCGCAATG ACGGCCATTA ATTACGCTAA AGAAGCCGAT
GTGCCAGTGG TGTTGACATT AGGGACACGC TTTTTAATTC AAGAAGATCC ACAATGGTGG
CAAAATTTTA TTAGTGAGCA TGTTACTATT TTGGCCATGA ATGAAGATGA AGGTGAAGCG
TTAACGGGTT TTAAAGACCC GTTGCTTGCC AGTGAAATGG CACTTGATTG GTGTGACATG
GTGTTAACTA CGGCAGGCGC GATTGGGCTT TATACTGCGG GTTATACTGA AGATGCTGAA
AAGCGTGAAA CCAGTCATAC TTTATTACCG GGCGCTATTC CTGAGTTTAA CCGTTATGAG
TTCTCTCGCC CGAAATTACA AGTGGATTGC GATACCCCAA TAAAAGTGTA CGCTCACATT
GCGCCTTATA TGGGTGGACC AGAATTAATT CGTAATACCA ATGGCGCTGG TGATGGAGCC
TTGTCTGCGC TGCTGCATGA TTTATCAGCC AATACGTTCC ATAAAACCAA TGTGCCTGGT
TCGAGTAAAC ATAAACGAGA TGGTTTATGT TATTCGTCAT TTTCACAAGT GTGTAAATAT
GCCAATCGCG TTGCATATGA AGTGCTAGCT CAGCACAGCC CGCGTCTGTC TCGTGGTTTA
CCTGAGCGGG AAGACAGTTT AGAAGAGTCA TATTGGGAAC GATAA
 
Protein sequence
MKFPGQRKSK HYFPVNSRDP LLAQLTQQPQ PFSTYICGID QTLVDIEAKV EDELLERYGL 
PKGNSTLIND EQAHNLYHEL KSNEMISDEF AGGTIGNTVH NYSILADDRS VLFGVMSQHI
MVGSYAYRYL CNTSSKVDLN FLQPVDGPIG RCFTLISDCG ERTFAISKGA MDKLTPEYID
KEVVQGSSAL VLTAYLMRAS EGDGITDAAM TAINYAKEAD VPVVLTLGTR FLIQEDPQWW
QNFISEHVTI LAMNEDEGEA LTGFKDPLLA SEMALDWCDM VLTTAGAIGL YTAGYTEDAE
KRETSHTLLP GAIPEFNRYE FSRPKLQVDC DTPIKVYAHI APYMGGPELI RNTNGAGDGA
LSALLHDLSA NTFHKTNVPG SSKHKRDGLC YSSFSQVCKY ANRVAYEVLA QHSPRLSRGL
PEREDSLEES YWER