| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1521 |
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| Symbol | |
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| ID | 4277476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1814669 |
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| End bp | 1816426 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638134301 |
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| Product | peptidase M61 domain-containing protein |
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| Protein accession | YP_750210 |
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| Protein GI | 114562697 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTATC ATATTCATGC GGTCGACCCT AAAGCTCATT TATTTGAAGT TACCTTTACG
CTAAAAAATG CCAATCCATC TCAGATTTTC TCTTTACCAG CATGGTTACC TGGCAGCTAC
ATGATCCGTG ATTTCGCCAA AAACATTATT GAAATTGATG CCAAAGAAAA CCAACAAACA
TTGTCGGTGA CTCAACTAGA TAAACAAACA TGGCAATTGA ATAACCAAGG TAGTCACATT
AGCTTGTGCT ACCAAATTTA TGCATGGGAT TTGTCTGTTC GCACTGCACA CCTTGACACT
AACCATGGCT TTTTTAATGG CAGCAGTGTA TTTCTTGCAG CAAATAGTCT TGAGTATCAA
CCGCATACCG TTACTATTGC CAAACCTGCA CTTGCAGAAT TAGCTCATTG GACGCTAGCC
ACCAGCATGA CTAGAGCCTC TGGTGAACAA TTCAGCTTTG GTGAGTTTAG TGCTGAAAAC
TACGATGACT TAATTGATCA TCCCGTTGAA ATGGGTGAAC TAACCATCGA AACATTTCAT
GCAGCCAGTG TTCCACACGA TATCGTTCTC AGTGGCAAAC ACAGAGCCAA TATGGTTCGA
TTGGCCAAAG ATTTAAAAGC AATATGCGAA TACCAAATTG ACTTATTTGG CACTCCAGCG
CCCTTTAAGC GTTATGTGTT CATGACCACG GTTTTGGACA ATGGTTTTGG TGGCTTAGAG
CATAAAGCAT CAACCGCCTT AATGTGCTCT CGCAACGACT TACCTTTGTC ACTAGATACG
CCAGTGGATA AAGGTTATCG CACTTATTTA TCCCTGTGCA GCCATGAATA TTTCCATTCA
TGGAACGTTA AACGGATTAA ACCTGCTGAG TTTACACCGT TTGACTTATC ACAAGAGTCT
TATACCTCTC AATTGTGGGC GTACGAAGGT ATCACGTCAT ATTACGATGA TTTAATTACC
TTTAAATCAC AGTGTATTGA TGAGAAAGGT TACCTTACTT TACTCAGTCA AATTATGACT
CGAGTATACC GAGGCGAAGG TCGCTTTAAA CAAACCTTAA AGCAATCAAG TTTTAATGCT
TGGACTAAGT TTTATAAGCA AGATGAAAAT GCCGCCAATG CCATCGTCAG CTATTATACC
AAAGGCGCAT TATTTGCCTT GTATGTAGAC TTAACCATCC GTATTGAAAC CCAAGGAAAA
CATAGCCTTG ATGATGTTAT GCGTCAACTT TGGCAACAAT ATGGTTTAAC GGGTGTTGGT
ACTGAATCGT CAAGCCATCA ACAGATTGTT GAAACGCTAT TAAATCGTCC TTGTGACGAT
ATCTTTACTT ATCTCGATAA CACAGACGAT TTGCCGCTAA AAGAATTACT GGCTCAAGTG
GGTGTAGACA TGAGTTTACG GGCCAGTGAA GGTACAACTG ATTTGGGTGG TGCTGAAGCC
ACTGGTTATA AAATTGGTTT TGGCGCTAAA ACAAAAGTTG AATCATTAGG GTTAAAAATT
CTAACGGTTA GCCAACACAG TCCTGCACAT CAAGCGGGAT TAAGTGCGGG TGATTTATTG
ATTGCGGCAG ACAACTTGCA GGTAACGAGT CAATTTGAAC AACAACTGCA AAGTCGAACC
CTTGGCGAAC AAATCACTTT ACACTGGTTT AGACGAGATG AATTGATGCA AGGAACATTA
ACGACTAGTG AAGCGGCTTT AGACACGATT TCGCTTAGCA TCAACGATGC GACTAAAACA
CAATTGTGGC TTGGTTAA
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| Protein sequence | MHYHIHAVDP KAHLFEVTFT LKNANPSQIF SLPAWLPGSY MIRDFAKNII EIDAKENQQT
LSVTQLDKQT WQLNNQGSHI SLCYQIYAWD LSVRTAHLDT NHGFFNGSSV FLAANSLEYQ
PHTVTIAKPA LAELAHWTLA TSMTRASGEQ FSFGEFSAEN YDDLIDHPVE MGELTIETFH
AASVPHDIVL SGKHRANMVR LAKDLKAICE YQIDLFGTPA PFKRYVFMTT VLDNGFGGLE
HKASTALMCS RNDLPLSLDT PVDKGYRTYL SLCSHEYFHS WNVKRIKPAE FTPFDLSQES
YTSQLWAYEG ITSYYDDLIT FKSQCIDEKG YLTLLSQIMT RVYRGEGRFK QTLKQSSFNA
WTKFYKQDEN AANAIVSYYT KGALFALYVD LTIRIETQGK HSLDDVMRQL WQQYGLTGVG
TESSSHQQIV ETLLNRPCDD IFTYLDNTDD LPLKELLAQV GVDMSLRASE GTTDLGGAEA
TGYKIGFGAK TKVESLGLKI LTVSQHSPAH QAGLSAGDLL IAADNLQVTS QFEQQLQSRT
LGEQITLHWF RRDELMQGTL TTSEAALDTI SLSINDATKT QLWLG
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