| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1509 |
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| Symbol | |
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| ID | 4277464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1800064 |
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| End bp | 1802667 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638134289 |
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| Product | nitrite reductase (NAD(P)H), large subunit |
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| Protein accession | YP_750198 |
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| Protein GI | 114562685 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTCT CAAAACCCAA GTTAGTGGTC GTTGGTAATG GCATGGTTGG TCATCATTTT
ATTGAGCAAT TGTGTAGTTT AGGACTCAAT AAAACGTTTG ACGTACACGT GTTTGGCGAA
GAGCCGCGTC CAGCTTATGA CCGAGTGCAG CTGTCAAAAT ATTTTGAGAC CGGTAGCGCG
GATCCATTGA TGTTAACCAG TGCGCAAGAT TATCAAGATT GGGGCATTAC GCTTCACTTG
AATACACCTA TTACGGCAAT TGATATTGCC GCCAAAACGG TGACCAGCGC GCAAGGTGAC
CATTATTCTT ATACCCGTTT AGTACTTGCA ACGGGATCAT TTCCGTTTGT ACCACCGATA
CAGGGTAACG ATCGCGCTCA GTGCTTGGTG TATCGCACCA TTGAAGATCT TGAGGCGATT
CAAGCCGCAG CCCAAAACAG CCAAGTTGGG GTGGTGGTTG GTGGAGGACT ATTAGGCTTA
GAAGCCGCCA ATGCCATGAT GCAGCTTGGG GTAAAAACTC ACGTTGTAGA GTTTGCGCCT
CAACTGATGC CCGTTCAGCT AAATGATAAA GCCGGTGAAT TACTGTGCAG TAAAATCGAA
CAGCTCGGCG TGAGTGTACA TACTTCAAAA GCCACCACTG CGATTATTGA CGGTGAAACG
GCAATGCATC GAATGACCTT TAATGATGAG TCTTATCTTG AAACTGACAT GATTGTGTTT
TCTGCCGGTA TTCGTCCACA AGATTCATTA GCACGTATTT CCAATATCAG TATTGGTGAA
CGTGGCGGCA TTGAAATTGA TGATTACTGC TTAACCTCAG CGCCAGATGT TTACGCCATT
GGTGAGTGTG CGTTATGGCA ACAAAAAATA TTTGGTTTAG TGGCTCCGGG TTACCAAATG
GCCCGTGTTG TGGCTTCGCA CATTGCCTCT TTAACCTCTA ATAGCGTGTC GCAGTCATTC
ACTGGTGCAG ACATGAGCAC CAAGCTTAAA TTACTGGGTG TTGATGTGGT TGCTATTGGT
GCTAGCCGAG GTTTTGATAA CGCCCAGTTT GTTGAGTTAT CTGATAACCA TGCGGGTATT
TATAAAAAAT TATGGTTAGA CGAAACTGGT AAATTTTTGA AAGGGGCGGT GTTAATTGGT
GATAACAGCG ATTACAGTCG CTTGCTCGAT AGCTATTTGT CTCAAGACGA GATCGAAGGT
TCTGCGGTTG AGTTATTGCT AGCAGGTGCT GAAAACGAAG CCGATTTAAA AGACACTTCT
ATTGTGTGTT CTTGTCATCA AGTGACCAAG GGCGACATTG TTGAAGCCGT GACCGCCGGC
AATCATAAAA TGGCTGAAAT CAAATCATGT ACTCGTGCAG CATCGGGTTG TGGTGGTTGT
GCACCGTTAG TTCAAAAAAT TATTGATCAA ACCTTACAAG CTGCAGGGCT CGACTTTAAT
GCTGGGATTT GTGCCCATTT TGATCATGAC CGACAAGCCT TGTATCACTT ATGCCAAGTC
GAAGGCATAA ATGATTTTAA TACCTTAATC ACTCTGCATG GCAAACCTTC AGCCAGTGGC
CACGCATATG GCTGTGATAT TTGCAAACCT GCAGCCGCGT CCATATTTGC CAGCCTACAA
AATCATTATG TGCTGGATCA AAATTTGGGT CATGTGCAAT TGCAAGACAC CAATGATGCT
TACTTAGGCA ACATCCAAAA AGATGGCACT TACTCTATTG TGCCGCGAGT CGCTGGTGGT
GAAATCACCC CAACTAAACT TATCGCCATG GGCCAAATTG CTCAAGAATA TGACCTCTAT
ACCAAGATAA CGGGTGGCCA ACGCATTGAT ATGTTTGGTG CAACCTTATC GCAGCTACCC
GAAATTTGGA AAAAACTCAT TGATGCCGGT TTTGAAACGG GTCATGCCTA CGGTAAGTCA
CTGCGCACGG TAAAATCCTG TGTTGGCAGT ACTTGGTGCC GTTACGGTGT ACAAGATGCA
GTTGGTTTCG CGATTGATTT AGAGAACCGC TACAAAGGCT TACGCAGTCC ACATAAATTA
AAATTTGCGG TGTCGGGCTG TACTCGTGAA TGTGCTGAAG CACAAAGTAA AGACATCGGC
ATTATCGCAA CCGACAAAGG TTGGAACTTA TATGTGGCTG GCAATGGCGG CATGCGTCCA
CGCCACGGTG ATTTATTTGC CACCGACTTA TCAACTCAAG ACCTCTATAA ATACATCGAT
CGCATTTTGA TGTTTTATGT CAAAACCGCA GACAAATTGC AGCGTACCTC GACCTGGATG
GATTCATTAG AAGGTGGTCT AGCATATTTA AAATCAGTCG TTATTGACGA TGCGTTGGGG
ATTAACTCGA TCTTAGAGCA GCAGATGGAC CATATTGCCG CCACATACCA ATGTGAGTGG
AAAACCAGCC TTGAACAACC GGCCTTTCTG GCGCGCTTTA ATGAGTTTGT TAATCCAAGT
GATGCGCCAG AAGCTGATAC CAGTGCTTAC CAGCGAATTC GTGAGCAACG TTTTCCGAGT
ATTAAAGACG CAGGGGCAGG AACAATAGCG ATTAAAGATA TTACAGACGA TGCAGCACAA
CTCGCAGTGG AGGAATTAGC ATGA
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| Protein sequence | MAVSKPKLVV VGNGMVGHHF IEQLCSLGLN KTFDVHVFGE EPRPAYDRVQ LSKYFETGSA
DPLMLTSAQD YQDWGITLHL NTPITAIDIA AKTVTSAQGD HYSYTRLVLA TGSFPFVPPI
QGNDRAQCLV YRTIEDLEAI QAAAQNSQVG VVVGGGLLGL EAANAMMQLG VKTHVVEFAP
QLMPVQLNDK AGELLCSKIE QLGVSVHTSK ATTAIIDGET AMHRMTFNDE SYLETDMIVF
SAGIRPQDSL ARISNISIGE RGGIEIDDYC LTSAPDVYAI GECALWQQKI FGLVAPGYQM
ARVVASHIAS LTSNSVSQSF TGADMSTKLK LLGVDVVAIG ASRGFDNAQF VELSDNHAGI
YKKLWLDETG KFLKGAVLIG DNSDYSRLLD SYLSQDEIEG SAVELLLAGA ENEADLKDTS
IVCSCHQVTK GDIVEAVTAG NHKMAEIKSC TRAASGCGGC APLVQKIIDQ TLQAAGLDFN
AGICAHFDHD RQALYHLCQV EGINDFNTLI TLHGKPSASG HAYGCDICKP AAASIFASLQ
NHYVLDQNLG HVQLQDTNDA YLGNIQKDGT YSIVPRVAGG EITPTKLIAM GQIAQEYDLY
TKITGGQRID MFGATLSQLP EIWKKLIDAG FETGHAYGKS LRTVKSCVGS TWCRYGVQDA
VGFAIDLENR YKGLRSPHKL KFAVSGCTRE CAEAQSKDIG IIATDKGWNL YVAGNGGMRP
RHGDLFATDL STQDLYKYID RILMFYVKTA DKLQRTSTWM DSLEGGLAYL KSVVIDDALG
INSILEQQMD HIAATYQCEW KTSLEQPAFL ARFNEFVNPS DAPEADTSAY QRIREQRFPS
IKDAGAGTIA IKDITDDAAQ LAVEELA
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