| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1486 |
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| Symbol | rbgA |
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| ID | 4278053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1774572 |
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| End bp | 1775513 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134267 |
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| Product | ribosomal biogenesis GTPase |
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| Protein accession | YP_750176 |
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| Protein GI | 114562663 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1161] Predicted GTPases |
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| TIGRFAM ID | [TIGR03596] ribosome biogenesis GTP-binding protein YlqF |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTC AGTGGTATCC AGGACACATG CACAAAGCAC GTAAAGAGAT CGAGGAGGCA
ATGCCTCAAG TGGATCTCGT TATTGAAGTG CTCGATGCAC GTATTCCATA CAGCAGTGAA
AATCCGATGG TGTCACAACT ACGTGGTGAT AAACCCTGCA TTAAATTACT GAATAAATCT
GATTTAGCCG ATCCTAAGGT TACCGCTCAA TGGATTGAAT ACCTAGAACG TGAACAAGGC
GTTCAGGCAT CAGCAATCAC AAGTTTACAA CCCAGTATGG TAAAAAGCAT TCCTGATCTT
TGCCGTAAAC TGGTGCCACA CCGTGACATC ATGGAAAAAG ACATTCGCAC CATGATCATG
GGTATTCCTA ACGTCGGTAA ATCTACAATT ATTAATACCT TAGCGGGTCG CACTATAGCT
AAAACGGGTA ATGAACCTGC AGTCACAAGA CGTCAGCAAC GTATTAACTT ACGTAACGGA
ATCGTACTAT CGGATACTCC GGGCATTTTA TGGCCAAAAG TGGACAACGA AGCCAGTAGC
TATCGCCTTG CTGTCACCGG TGCAATTAAA GATACCGCTA TGGAATACGA AGATGTGGCA
ATGTTTGCTG CTGGCTATTT CCTTGAAGCC TATCCTGACG AAATTTGTGA ACGTTATAAG
CTTCAATCGC TACCAGCCAG CGATATCGAA TTACTCGAAG CTATCAGTCG TTCTCGCGGA
GCACTTCGCC CTGGCGCCCG AGTTGATTAC CATAAAGTAT CTGAACTATT ACTACATGAA
TACCGCTCAG GGAAAATCGG ACTTTTAAGC CTTGAAACTC CAGCGATGGC TGAAGTAGAA
AAAGAGGAAG TTGCACGTAA ATTAGCTGAG AAAGAACTCA TTAAACAGCA GAAAATAGAG
CAAGAGAAAC TTAAACGCTC CGGTAAACGT TATAACGATT AA
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| Protein sequence | MAIQWYPGHM HKARKEIEEA MPQVDLVIEV LDARIPYSSE NPMVSQLRGD KPCIKLLNKS
DLADPKVTAQ WIEYLEREQG VQASAITSLQ PSMVKSIPDL CRKLVPHRDI MEKDIRTMIM
GIPNVGKSTI INTLAGRTIA KTGNEPAVTR RQQRINLRNG IVLSDTPGIL WPKVDNEASS
YRLAVTGAIK DTAMEYEDVA MFAAGYFLEA YPDEICERYK LQSLPASDIE LLEAISRSRG
ALRPGARVDY HKVSELLLHE YRSGKIGLLS LETPAMAEVE KEEVARKLAE KELIKQQKIE
QEKLKRSGKR YND
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