| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1478 |
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| Symbol | bioD |
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| ID | 4277574 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1767391 |
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| End bp | 1768101 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134259 |
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| Product | dithiobiotin synthetase |
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| Protein accession | YP_750168 |
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| Protein GI | 114562655 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0132] Dethiobiotin synthetase |
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| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGTACT TTGTGACAGG AACAGATACC GACAGCGGCA AAACATTAGT TTCGGCAGCA
TTACTATCAA AGGCTCAAGG CCATAAATGC GGCTTTAAAC CCATTGCATC AGGATGTATA
TCCACAGATG TGGGCTTACG CAACAGTGAT GCCTTAATGC TAATAGCTCA GTCGAATATA
GATTTACCAT ATCAAGTGGT TAATCCTATT AGTTTTGAAC CCGCTATAGC ACCGCATATT
GCCGCCAAGC TAGTTAATCG AACATTAACA GCGCAAAGTG TCCTTGATAC TATGTACAAC
CCCGCGATGT TAGAAGCAGA TTTTGCCTTG ATAGAAGGTG CTGGTGGCTG GCGCTTACCG
TTTGGTAATG GTGAGTATTT ATCTGATACT GTCAAATTAT TGCAGACTAA ACTGCAACAA
GCACAACAAA TTCAAAACCC AAAAAAGAAG CCAAAGATAG AGGTTATTTT AGTGGTTGGC
ATGAAGCTAG GTTGTTTAAA CCATGCGTTG TTAACTCAAG AGGTTATATT GGCTGACGGA
TTAACGATAG CGGGGTGGGT GGCGAATCAA GTCGATGCTG AGATGGCTTT TATTGACGAC
AACCTCAACA GCTTACAGCA GATGATGCAG GCACCATTTT TAGGTTACGT GCCTCATTTA
ACGGCAGCAA CAGCTGAGAA TGCTGCTGTT TATCTGCAAT TACCTCAATA A
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| Protein sequence | MLYFVTGTDT DSGKTLVSAA LLSKAQGHKC GFKPIASGCI STDVGLRNSD ALMLIAQSNI
DLPYQVVNPI SFEPAIAPHI AAKLVNRTLT AQSVLDTMYN PAMLEADFAL IEGAGGWRLP
FGNGEYLSDT VKLLQTKLQQ AQQIQNPKKK PKIEVILVVG MKLGCLNHAL LTQEVILADG
LTIAGWVANQ VDAEMAFIDD NLNSLQQMMQ APFLGYVPHL TAATAENAAV YLQLPQ
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