Gene Sfri_1473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1473 
Symbol 
ID4277569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1761925 
End bp1762818 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content42% 
IMG OID638134254 
Productchromosome replication initiation inhibitor protein 
Protein accessionYP_750163 
Protein GI114562650 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID[TIGR03298] transcriptional regulator, ArgP family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC TTGATTATAA ATTGCTGCAA GCATTGAGTT GTGTGATTAA AGAACAAAGT 
TTTGAGCGTG CAGCAGGTGT GTTGTGCTTA TCGCAATCGG CGGTGTCACA GCGGATTAAA
CAATTAGAGC AACAGTTTGC TCAACCAGTA TTGATTAGAA GCCAACCTAT TCAAACTACA
GATTTAGGTA AGCAGCTCTT AAAGCACTAT TACCAAGTGG TACAGCTAGA AGCTGACGTA
CTTCCTAGTG CTATGCCTCA TTCGCCCCAG ACTCCGTTAA CTCTGAATAT CGCCACCAAT
GCCGACACGT TGGCAACTTG GCTCATTCCG GCAATAGCCC CAGTGATTAA GTCACATTTA
GTTGAGATAA ATCTGCTGAT TGAAGGTGAA GCTCGTACGA TTAATAGGTT AAAGGATGGC
CAAGCTTTTG GTGCCATTTC GGTGCAATCT ACACCGATTA AAGGTTGTCA ATTAACTCGA
TTAGGCTGTG TCGACTATCT GCTAGTGGCG TCACCTGAGT TTAGTCGTGA TTATTTCCCT
AACGGCATTA GTGCTGACAG CCTTAGAAAA GCACCGGGTA TTGCGTTTGA TCATAAAGAC
AATATGCACA CACGTTATAT TCAACAGCAT TTTGGTTTGA TGCAAGGTGA ATATCCATTA
CATGCTGTGC GTTCATCAGA TGCTTTTGTG ACCATGGCTA AACATGGTGC TGCCTATTGT
TTAGTACCAA AAACGCAAAT TAAACCAGAA CTAGCCACTG GTGAGTTAGT GCACATATGT
AAAGACCATA TCATCACTGA AACGCTTTAC TGGCACCATT GGATTTTACT TAAAGGTGTC
TATAAAGACG TTTCAGATGC CATTATTGCC CACGCTCAAT CGGTATTAGA TTAA
 
Protein sequence
MSKLDYKLLQ ALSCVIKEQS FERAAGVLCL SQSAVSQRIK QLEQQFAQPV LIRSQPIQTT 
DLGKQLLKHY YQVVQLEADV LPSAMPHSPQ TPLTLNIATN ADTLATWLIP AIAPVIKSHL
VEINLLIEGE ARTINRLKDG QAFGAISVQS TPIKGCQLTR LGCVDYLLVA SPEFSRDYFP
NGISADSLRK APGIAFDHKD NMHTRYIQQH FGLMQGEYPL HAVRSSDAFV TMAKHGAAYC
LVPKTQIKPE LATGELVHIC KDHIITETLY WHHWILLKGV YKDVSDAIIA HAQSVLD