Gene Sfri_1458 details

Gene Information

• Locus tag: Sfri_1458
• ID: 4278462
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1743571
• End bp: 1743969
• Gene Length: 399 bp
• Protein Length: 132 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 638134233
• Product: 4-hydroxybenzoyl-CoA thioesterase
• Protein accession: YP_750148
• Protein GI: 114562635
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0173247
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGTTT GGCCTATTTC AGTCTATTAC GAAGATACCG ATGCCGGTGG TGTTGTGTAC 
CATTCTAATT ACTTAAAATT TTTTGAACGA GCCCGAACGC AATGGTTAAA ATCAATGGGT 
GTTCGCCAAG CTGAACTGTT GTCAGAAGAT ATTGCTTTTG TCGTCAAACA TGCAGAATTA 
GATTTTCGTA AAGCTGCAAA ATTTGAACAG GATTTTGTGG TTGAATCAAA AGTTATAGAA 
TTAAAAAAAG TGTCGTTGGT GTTTCACCAG CGGCTAGTTG ATCATCAAGG TGATTGCTAT 
TGTGAAGCGA CAGTTGTTGT CGCGTGTATA TCTTTATCAC GTATGCGTCC CCGCGCTATT 
CCCCTAAATA TTGTTCAGGA GTTTGACAGT GCACGCTGA 

 

Protein sequence

MFVWPISVYY EDTDAGGVVY HSNYLKFFER ARTQWLKSMG VRQAELLSED IAFVVKHAEL 
DFRKAAKFEQ DFVVESKVIE LKKVSLVFHQ RLVDHQGDCY CEATVVVACI SLSRMRPRAI 
PLNIVQEFDS AR