| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1444 |
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| Symbol | |
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| ID | 4277261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 1723591 |
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| End bp | 1725381 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134219 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_750134 |
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| Protein GI | 114562621 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0729] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGGCT TGGTGCTGGC CGACGAAAAT TGGTTAACGA TTAACGTTAC CGGCGTGCCG
AAAAAAATTG AAAAGAACAT TTTTGCCCAT TTAGGCACAT TGCCAGATAA CGATGTTCAG
CGCCGAGCAT TTTTATTTAC GGTTGACGAT AACACCCATG ATGCGCTTGA ATCCATGGGC
TATTACCATG CAATTTTAGA TATTGATGTT AAAGAGAATG ATAAAGGCCC TTGGGAGTTA
AGCCTCAATA TAATGCCAGG TGAACCGGTC ATTATTCAGT GGGTAGATAT CCATTTTCAA
GGTGACATGC TCCAAGATAA TACTTTCTCG TTGTGGCTAA ATAGTCTGAA AATAAAACCT
GGTGATACCT TAAACCATGG TGTCTATGAT TCGATAAAAT CACAATTAGT CACGTTAGCA
CTGGCAAGAG GATATTTTGA TGGTCAATAT ACCAAATCAG AAATCAACAT TAACCGTGAC
TTAAATACCG CCCAAATTAA CCTACAGTTT AACTCGGGTA AGCGCTATTT ATTTGGTGAT
GTTCACTTTG AAGGCAGTAC TCTCAATAAT GATGTTGTCG AAGCCTTAAT TCCTTTTGAT
GCTGATGCGC CTTACGCCAC ACAGCTATTA ACTGAGTTTA ATCGCAATTT ATTAGATACA
GGTTACTTTA GTAATATCAA AGTATTACCA CAACTAAACA AAATTGATAC TGGTGTAGTG
CCGATTAAAG TTGAGCTAAG CCCGCGGCCT AGTCATCTTA TTGAAGTCGG TTTAGGCGCA
GATATTGGAA ATAGTACAGA AAACAGTGTC GATCCTCGTG TGCGAGTCAC TTGGCGAACG
CCGCAAATCA ATCGCTATGG CCATTATCAA GAAACCAGTG CAGAGTGGTC ACCTGAGCGG
CCTAAGATTT TAACCACTTA TACTATTCCG TTAACCCACC CTTTAGATGA TCAACTGAAA
ATAAAACTTG GCTTATTACG CGACACCTAT GGTGTTACCC AAGATTACGA CGCTGATAAA
CGCCAATTTA ATAATACCGG GCAATTAGAG TCTAAAAAGT ATCTCGTTGG GTTAACGCGT
CAAAGGCGCT CTAAAAGTAA TTGGTTACAT GGATATTCAA TTGAATCCGT GAGAGAGTTT
TATAATCAGC TCGATACAGA TTACGACCCA CGTTTTTATT TGTTGGGTTT CAACCTCACC
AAAACCGTCC GTGGCGACAA CACGCTCGAT CCCAAATCAG GCTATCGTCA AACTTACAGT
GTTGAATACG CCGACCCGTC CCTGGGCTCA ACTATCCGTC TGGCCCGTTT ACAAGCCCGG
TTTAAATGGG TAGATACAAT ATTCGATAAG CATCGTTTTG TTGCCCGGGT GGATTTAGGT
GCTAACATTG CTGACAAAAA CGATATGGCT AATATACCGC CATCGTTACG ATATTTTGCC
GGTGGCGACC AAAGCATACG AGGTTACAGT TACCAAGAAT TAGGCCCCTA TATTGACTAC
ACCAACAGTG AAGGCGGCTT ATCTCGACAG GTTGTCGGTG GGCGCTACTT GGCGATTGGC
AGTGTTGAAT ATCAATATTA TCTTACCCCG ACATGGCGAG TTGCCACCTT TGTCGATGCT
GGTAATGCTT TTGATACACA ACAGTTTGAA CCGGTAGTAT CGGTTGGTGG AGGATTACAC
TGGATATCAC CTATTGGCCC GATTCGAATG GACCTAGGTT TTGGCTTAAA AGAAACCGAG
ACAGTTGCAC GTTCATATCG TTTCCATTTA ACCATGGGAA CTGATTTATG A
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| Protein sequence | MSGLVLADEN WLTINVTGVP KKIEKNIFAH LGTLPDNDVQ RRAFLFTVDD NTHDALESMG
YYHAILDIDV KENDKGPWEL SLNIMPGEPV IIQWVDIHFQ GDMLQDNTFS LWLNSLKIKP
GDTLNHGVYD SIKSQLVTLA LARGYFDGQY TKSEININRD LNTAQINLQF NSGKRYLFGD
VHFEGSTLNN DVVEALIPFD ADAPYATQLL TEFNRNLLDT GYFSNIKVLP QLNKIDTGVV
PIKVELSPRP SHLIEVGLGA DIGNSTENSV DPRVRVTWRT PQINRYGHYQ ETSAEWSPER
PKILTTYTIP LTHPLDDQLK IKLGLLRDTY GVTQDYDADK RQFNNTGQLE SKKYLVGLTR
QRRSKSNWLH GYSIESVREF YNQLDTDYDP RFYLLGFNLT KTVRGDNTLD PKSGYRQTYS
VEYADPSLGS TIRLARLQAR FKWVDTIFDK HRFVARVDLG ANIADKNDMA NIPPSLRYFA
GGDQSIRGYS YQELGPYIDY TNSEGGLSRQ VVGGRYLAIG SVEYQYYLTP TWRVATFVDA
GNAFDTQQFE PVVSVGGGLH WISPIGPIRM DLGFGLKETE TVARSYRFHL TMGTDL
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