Gene Sfri_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1442 
Symbol 
ID4277259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1719245 
End bp1719532 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content40% 
IMG OID638134217 
Product50S ribosomal protein L25 
Protein accessionYP_750132 
Protein GI114562619 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1825] Ribosomal protein L25 (general stress protein Ctc) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTACA CAATCAACGC AGTAACCCGC ACAGAAATCG GGAAAGGTTC GAGCCGCCGC 
CTACGTCATG CCGGTAAAGT TCCTGCAGTA ATTTATGGTC CAGGTAAAGA GCCTGTATCA
ATCAAGTTTG AACACAAAGA CATCATTAAC ATCCAGTTAA ATGATGACTT TTACACAACT
GACTTAACCG TTTCTATTGA AGGTAAAGAA GTTAAAGTTC GTGTAAAAGC TATCCAACGT
CACGCATTCA AGCAATTGGT TGAACACATT GACTTCATGT TTGCTTAA
 
Protein sequence
MSYTINAVTR TEIGKGSSRR LRHAGKVPAV IYGPGKEPVS IKFEHKDIIN IQLNDDFYTT 
DLTVSIEGKE VKVRVKAIQR HAFKQLVEHI DFMFA