Gene Sfri_1439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1439 
Symbol 
ID4277256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1715974 
End bp1716249 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content38% 
IMG OID638134214 
Producthistone family protein DNA-binding protein 
Protein accessionYP_750129 
Protein GI114562616 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAA AACAACTCGC TCAAACTATG GCCAGTAAAA TGGACATTCC CCAAGTTCAA 
GCTAAGCAAC AACTTGAACA AATCCTCGCG GTAATTCATC AAGGTTTAGC TGAAGGTGAA
AAAATTTACA TCCCACAATT CGGTACATTT GAATTACGCT TTTACTTACC AAAAGTAGGT
CGTAATCCAC AAACGGGTGA AGCCATAGAG ATTGACGGAT TTAATCAACC CAGTTTTAAA
GTCTCACCCG CATTAAAAGC ATTGATCAAC GCTTAA
 
Protein sequence
MNKKQLAQTM ASKMDIPQVQ AKQQLEQILA VIHQGLAEGE KIYIPQFGTF ELRFYLPKVG 
RNPQTGEAIE IDGFNQPSFK VSPALKALIN A