Gene Sfri_1432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1432 
Symbol 
ID4277249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1706607 
End bp1707395 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content42% 
IMG OID638134206 
Productchromosome segregation and condensation protein ScpA 
Protein accessionYP_750122 
Protein GI114562609 
COG category[S] Function unknown 
COG ID[COG1354] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGGCA GTCAGCAAAG CCTGCCATTA GCAATGGTTC GTGGCCAAGC GCTTAATAGC 
ATGCCCGTAG ACTTGTTTAT TCCGCCAGAG GCCTTAGAAG TGTTTCTTGA AACCTTTGAA
GGCCCATTAG ATTTATTGTT ATATTTAATC CGTAAACAAA AATTAGATGT GGTTGATTTG
CCTATTCAAC AAATCACCCA ACAATATTTA CTCTATATTG AAATTCTCAC TGAAGCGCGG
ATTGAACTGG CTGCCGATTA CCTTGTGATG GCGGCAACAT TAGCGGAGAT TAAATCCCGA
TTATTGTTAC CTAAAATGGC CAGTGAAGAT GATGAGGAAG AAGATCCTCG AGTGGTGCTT
ATACGGCAAT TAAAAGCCTA TGAGGTGATC AAACAAGCTG CAGTCGATAT TGATACGTTA
CCGCGGATTG AACGAGATGT GTTTCAAGCA TCCGTTAGCG CGGCTCCAGA CATTAAACCT
ATAACAGTAC CGCCTGAAGT GTCGCTGGTG GATATTGCCC GTGCGTTTGG CGAAGTACTA
AAACGCATTG ATGCTAACGA AGATCATCAT GTAAAGCGTG AACATTTATC CACCCGTGAA
CGCATGAGCC AAATTTTAGC TAAGTTATCT AGTACAGAAT ACATTGGTTT TGAGTGTTTG
TTTGATGTCA GTGAAGGCCG AGCAGGTGTG GTAGTGAGTT TTTTGGCACT CATGGAGCTG
GTTAAAGAAT TACTCGTTGA GTTAGTGCAA AATGAACCGT TTTCACCCAT CTATGTAAAA
GCGTATTAA
 
Protein sequence
MPGSQQSLPL AMVRGQALNS MPVDLFIPPE ALEVFLETFE GPLDLLLYLI RKQKLDVVDL 
PIQQITQQYL LYIEILTEAR IELAADYLVM AATLAEIKSR LLLPKMASED DEEEDPRVVL
IRQLKAYEVI KQAAVDIDTL PRIERDVFQA SVSAAPDIKP ITVPPEVSLV DIARAFGEVL
KRIDANEDHH VKREHLSTRE RMSQILAKLS STEYIGFECL FDVSEGRAGV VVSFLALMEL
VKELLVELVQ NEPFSPIYVK AY