Gene Sfri_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1421 
Symbol 
ID4277919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1695939 
End bp1696238 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content41% 
IMG OID638134195 
ProductYciI-like protein 
Protein accessionYP_750111 
Protein GI114562598 
COG category[S] Function unknown 
COG ID[COG2350] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.310283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTATA TGATTTCATC TCAAGATGTT GAAAACAGTC TAGAAAAGCG TTTATCTGTT 
CGTGCTGAAC ATTTAGCACG TTTACAAGCT TTAGCCGATG AAGGCCGTTT ATTAACTGCC
GGACCACACC CTGCAATTGA TAATGAAAAT CCTGGTGAAG CGGGTTTCAC AGGATCATTA
GTTATTGCTG ACTTTCCTTC ATTAGAAGAT GCACAAGCTT GGGCTGATGT GGATCCTTAT
ATCGGTGCTG GCGTGTACAA AAGCGTTATC GTTAAGCCAT TTAAACGAGT GCTTCCTTAA
 
Protein sequence
MWYMISSQDV ENSLEKRLSV RAEHLARLQA LADEGRLLTA GPHPAIDNEN PGEAGFTGSL 
VIADFPSLED AQAWADVDPY IGAGVYKSVI VKPFKRVLP