Gene Sfri_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1417 
Symbol 
ID4277915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1690660 
End bp1691241 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content41% 
IMG OID638134191 
Producthypothetical protein 
Protein accessionYP_750107 
Protein GI114562594 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.99203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCTAA ACGCTCAGGG CCAACCAGCA CAAAACATGG TGGTGTATTT ACTCCCAAGC 
GCTCCTGCCA ATATTGTTAC CACAGTTGCT CCTAGTAAAG CTGAAGTTCA TCAAAAAGAT 
AAGCAATTCT CTCCTTATAT TACCGTTGTA CAAAAAGGCA ATGATGTGGC TTTTGTCAAT 
GAAGATGATA TTACTCATCA TATTTTTTCA GCACTAGGGC CTAAGCGTTT TTCATTCAAA 
CTTCGTCATC AGCAACAACA GCAAATATTG AGATTTGAGC AAACAGGGCA TGTGTCTATG 
GGCTGTAATG TGCATGACTG GATGTCGGGG CATTTATTGG TGGTCGACAC CCCATTTTAT 
GCTGTGACCA ATTTACAAGG GATAGTGACA TTTGAGCATT TACCGGCAGA TGACTTTAAG 
CTGGTTGTGT GGCATCCACA GTTAAAAATG CCTGATAATC AGCAAGTGAA ACCTGTTCAT 
TTTCCCAGTG ATAACACTAT GACTATTACA CTGCAGGCTG ATTTTGATAG TATCCCCAGC 
CAGCAAAGTT TAGATGAATT TGAATTTTTA GAAGGATACT AG
 
Protein sequence
MVLNAQGQPA QNMVVYLLPS APANIVTTVA PSKAEVHQKD KQFSPYITVV QKGNDVAFVN 
EDDITHHIFS ALGPKRFSFK LRHQQQQQIL RFEQTGHVSM GCNVHDWMSG HLLVVDTPFY 
AVTNLQGIVT FEHLPADDFK LVVWHPQLKM PDNQQVKPVH FPSDNTMTIT LQADFDSIPS 
QQSLDEFEFL EGY