Gene Sfri_1414 details

Gene Information

• Locus tag: Sfri_1414
• ID: 4277912
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1685927
• End bp: 1686379
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 638134188
• Product: 2Fe-2S iron-sulfur cluster binding domain-containing protein
• Protein accession: YP_750104
• Protein GI: 114562591
• COG category: [C] Energy production and conversion
• COG ID: [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0660371
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACCC CAACACAAAA ATTAATGGTC AACGGTAAGG ACTTTACCCT TGATGCAGAT 
CCTAATATGC CAGTGCTATG GGCTTTGCGC GACATACTTG GTTTCACAGG TACAAAGTTT 
GGTTGTGGTG CAGGACTCTG CGGCGCTTGT ACTATTCATG TTGATGGCAG CCCAATGCGT 
GGTTGTTTGA CCAGCCTTAA GCAAGTACAG GGCAAACAAG TGACAACCAT TGAAGGTCTT 
GAAGCGCAAA AATTGAAAGA CGCTTGGCTT GAACATAATG TGCCGCAATG TGGTTACTGT 
CAGGCGGGGC AATTAATGTC TGCTGCTGCG TTATTAAAAA CCACAACTAA ACCAACAGAG 
ACGCAAATTG ACGATGCAAT GTCGGGCAAT ATTTGTCGTT GTGGTACTTA CCCGCGTATT 
AAAGCGGCGA TCAAATCAGC TTCGGAGGCG TAA 

 

Protein sequence

MTTPTQKLMV NGKDFTLDAD PNMPVLWALR DILGFTGTKF GCGAGLCGAC TIHVDGSPMR 
GCLTSLKQVQ GKQVTTIEGL EAQKLKDAWL EHNVPQCGYC QAGQLMSAAA LLKTTTKPTE 
TQIDDAMSGN ICRCGTYPRI KAAIKSASEA