Gene Sfri_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1411 
Symbol 
ID4277104 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1683518 
End bp1684162 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content41% 
IMG OID638134185 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_750101 
Protein GI114562588 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.557584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTATC AAATCATCCC CGTAACGCCT TTTCAGCAAA ATTGTAGTGT TATTTGGTGT 
GAAAAAACCT TAAAGGCTGC GGTTGTTGAT CCTGGTGGCA ACATTGACCG GATTTTAGCT 
GAGGTGGCTA AGTTAGGAGT AAATGTTGAA AAAATATTAT TAACCCATGG TCATATTGAT 
CATGTCGGTG GTGCAGCTGA ATTAGCCAAA AAATTAGCAG TGCCGATTAT TGGTCCGCAC 
ATAGCGGATA AGTTTTGGTT AGAAAACTTA GTTAAACAAA GTCAAAACTT TGGTTTTCCA 
CGCACTGAAG CTTTTGAACC AACCCAGTAC CTAAATGAAG GTGATGAGGT TAGTGTAGGT 
GAGCAGCATT TACAGGTGTT ACATTGCCCA GGGCATACAC CAGGACACAT TGTTTTTTAT 
GATAAAATAG CTAATTTAGC TTGGGTCGGT GATGTGCTTT TTAGAGGCTC AATTGGTCGT 
ACTGATTTTC CCCAATCCAA TCATCAAGAC TTACTTCACT CTATTACCAC CAAATTGTGG 
CCATTAGGGC TCAATGTCAG TTTTATTCCC GGTCATGGAC CAATGTCGAC GTTCGCCGAC 
GAGCGACAAC ATAACCCTTT TGTTGCCGAT CAGTTATTTG ATTAA
 
Protein sequence
MKYQIIPVTP FQQNCSVIWC EKTLKAAVVD PGGNIDRILA EVAKLGVNVE KILLTHGHID 
HVGGAAELAK KLAVPIIGPH IADKFWLENL VKQSQNFGFP RTEAFEPTQY LNEGDEVSVG 
EQHLQVLHCP GHTPGHIVFY DKIANLAWVG DVLFRGSIGR TDFPQSNHQD LLHSITTKLW 
PLGLNVSFIP GHGPMSTFAD ERQHNPFVAD QLFD