Gene Sfri_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1409 
Symbol 
ID4277102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand+ 
Start bp1681272 
End bp1681928 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content40% 
IMG OID638134183 
Productnitroreductase 
Protein accessionYP_750099 
Protein GI114562586 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAATG CCATTATTGC TGATTTAGAA AAACGTTACA CTGCCAAACG CTATGATGCG 
ACTAAACGCG TGCCTAAAGA AGATTTAGCC GTGATTTATG ACGCTATGGT GTTATCGCCG 
TCATCAATTA ACTCTCAACC ATGGAAATTT ATCGTGATTG AAAGTGATGA AGCCAAGCAA 
CGTTTACATG ACTCTTATGC TAATAAGTTT CAGTTTAATC AACCGCATGC TAAAACGGCT 
TCACATACTA TATTGTTTGC ATATAACCCT AAGTATACCC GCGAAGACTA TGCCAAAGTG 
GTTGATCAAG GCATTATCGA TGGCCGTACT AAGCCTGAAG ATCGCGAAAG TGCATTTGGT 
GGATACGCAT TTGTTGATTT AAACACTGAT GAAGCGGGTA ACAATGCGGC TTGGACTAAG 
TCACAAACCT ATTTAGCATT AGGTAACACT ATGCATACGC TAGCGCGCCT TGGTATCGAC 
TCTACGCCAA TGGAAGGTGT TGATAGTGAA ATGCTAGGTC AAATATTTGC TAAAGAGCTG 
GACGGTTATG TGTGTGAAGT TGCATTAGCA TTTGGTTATC ATCATTCAGA TGAAGACTAC 
AACGCCAAGT TACCAAAATC TCGTTTAAAC ATTGATCAAG TGTTACAGGT TTTATAA
 
Protein sequence
MTNAIIADLE KRYTAKRYDA TKRVPKEDLA VIYDAMVLSP SSINSQPWKF IVIESDEAKQ 
RLHDSYANKF QFNQPHAKTA SHTILFAYNP KYTREDYAKV VDQGIIDGRT KPEDRESAFG 
GYAFVDLNTD EAGNNAAWTK SQTYLALGNT MHTLARLGID STPMEGVDSE MLGQIFAKEL 
DGYVCEVALA FGYHHSDEDY NAKLPKSRLN IDQVLQVL