Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1408 |
Symbol | |
ID | 4277101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1680444 |
End bp | 1680989 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638134182 |
Product | redoxin domain-containing protein |
Protein accession | YP_750098 |
Protein GI | 114562585 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTACTTG ATACACCCAT TTGCGATTAT GGCTGGAAAG CCCCTGATTT CACATTGAAA GATGCCAATG GTAATGCTTT TACCATGAGT GATCACTTAG GAGAAAAGGG CTTATTGATT ATGTTTATTT GTAATCATTG TCCTTATGTT AAAGCCATTG CGACGCGTTT AGCTGCGGAT ACAAAGCAAT TAATGGCTGA AGGCATCAAT GTGTTAGCGG TCATGTCTAA TGATTATCAT GATGTTGAGG CTGACTCGCC AAAAAATATG CTGAGTTTTG CCAAGCAACA TGGTTTTGAA TTTGCTTATT TAGTGGACGA AGATCAGCAA GTGGCTAAGC AATATGGTGC TGTGTGCACT CCTGACTTTT TTGGTTTTAA TTATCTCGGT GAATTGCAAT ATCGTGGCCG ATTAGATGAT GCGCGTTTGC AAGATGCGCC GAACAGAGAA CCTGAGCTAC TACAAGCCAT GCAAATGATT GCTGCAATAG GCAAAGGGCC TAAACAGCAA ACTGCCAGCA TGGGTTGCTC TATTAAATGG CGATAA
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Protein sequence | MLLDTPICDY GWKAPDFTLK DANGNAFTMS DHLGEKGLLI MFICNHCPYV KAIATRLAAD TKQLMAEGIN VLAVMSNDYH DVEADSPKNM LSFAKQHGFE FAYLVDEDQQ VAKQYGAVCT PDFFGFNYLG ELQYRGRLDD ARLQDAPNRE PELLQAMQMI AAIGKGPKQQ TASMGCSIKW R
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