Gene Sfri_1408 details

Gene Information

• Locus tag: Sfri_1408
• ID: 4277101
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella frigidimarina NCIMB 400
• Kingdom: Bacteria
• Replicon accession: NC_008345
• Strand: +
• Start bp: 1680444
• End bp: 1680989
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 638134182
• Product: redoxin domain-containing protein
• Protein accession: YP_750098
• Protein GI: 114562585
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG1225] Peroxiredoxin

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTACTTG ATACACCCAT TTGCGATTAT GGCTGGAAAG CCCCTGATTT CACATTGAAA 
GATGCCAATG GTAATGCTTT TACCATGAGT GATCACTTAG GAGAAAAGGG CTTATTGATT 
ATGTTTATTT GTAATCATTG TCCTTATGTT AAAGCCATTG CGACGCGTTT AGCTGCGGAT 
ACAAAGCAAT TAATGGCTGA AGGCATCAAT GTGTTAGCGG TCATGTCTAA TGATTATCAT 
GATGTTGAGG CTGACTCGCC AAAAAATATG CTGAGTTTTG CCAAGCAACA TGGTTTTGAA 
TTTGCTTATT TAGTGGACGA AGATCAGCAA GTGGCTAAGC AATATGGTGC TGTGTGCACT 
CCTGACTTTT TTGGTTTTAA TTATCTCGGT GAATTGCAAT ATCGTGGCCG ATTAGATGAT 
GCGCGTTTGC AAGATGCGCC GAACAGAGAA CCTGAGCTAC TACAAGCCAT GCAAATGATT 
GCTGCAATAG GCAAAGGGCC TAAACAGCAA ACTGCCAGCA TGGGTTGCTC TATTAAATGG 
CGATAA 

 

Protein sequence

MLLDTPICDY GWKAPDFTLK DANGNAFTMS DHLGEKGLLI MFICNHCPYV KAIATRLAAD 
TKQLMAEGIN VLAVMSNDYH DVEADSPKNM LSFAKQHGFE FAYLVDEDQQ VAKQYGAVCT 
PDFFGFNYLG ELQYRGRLDD ARLQDAPNRE PELLQAMQMI AAIGKGPKQQ TASMGCSIKW 
R