| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1407 |
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| Symbol | |
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| ID | 4277100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1678752 |
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| End bp | 1680221 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638134181 |
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| Product | ABC transporter related |
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| Protein accession | YP_750097 |
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| Protein GI | 114562584 |
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| COG category | [H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1119] ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.740613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCA GACTTACGCA GTTGCAGTGC AGTTCATCGA GTGTCACTGT CGACATTAAT
GATTGGGTTA TTGAGCCTCA ACAATCTTGG GGGGTATTTA GCACCGAAGG TGATGTAGGT
GCATTGCTTG GCCAGTTATT AACTCAGCAA ATTGATGCGC AAACCTTAAC TTACAGTGGC
GATATTATCG GTGTCACGCC AGCAAGTGTG GCATTAGTGT CATTGCTTGA ACAGCAATCA
CTGCTTGAAG CTATTTTAGA GCAAGATGAC AGCGAATCAC TGGGATATAC CGATCCTAAA
ACGACCGTGT TTGGGGTTGT TTTTAATCAA TGCCATGACA ATGACTTAAC CCATCAATTG
CTGCAACAAT TAGATTTAAC GCATTTAAGC TTAAGTCCTT TTGCTCAATT GTCTACCGGT
GAAGGCCGCA GAGTAATGCT TGCTCGTGCA GTAGCAACTC AAGTGCCTTT TTTAGTGCTC
GACGAACCTT ATGCAGGTCT TGATGTTGCG CACAGACAGA CTCTCACAGA ATATTTACAA
CAATTATCTC AAACCAAACA GATACTGGTC GTGGTGTCGC GTGAAGAAGA TATGCCAGAT
TGGATTGAAC ATGTTGCTAT GTTTAGTCAT GGTAAATTAG ACACTATGAT GACCAAATCA
CAGTGGGATA ACCATCCTGT TATTGCCCAG TTAACGGCGC AAGCGGGTCA ACAAAGTGAT
GATATATTGG CGCTTATTCG TCGTCACAGA CACAAGCCAT TATTTGCTAA CCCGGTATTT
CAGTTAAACA ATGGACGAGT GGCTTACAGC GATAAAGTGA TTTTTTCGGG TGTTAACTGG
CGTATCGATA ATGGTGTGCA TTGGCAAGTA AAAGGGCCTA ATGGCTGCGG TAAGAGTACT
TTACTGGGGC TTATTTTTGG TGACCATCCA CAATGTTACA GTAATGATAT TGATATTTTT
GGTAACAAAA GAGGTTCTGG CGAAAGTATT TGGGAAATTA AAAAACACAT CGGTATGGTG
TCTTCGGCAT TACATCTGCA ATATCGGGTT AACTGTAGCG CACTGGATGT GATTGTTTCT
GGCTTTTATG ATTCTATTGG TTTGTACCAA AAACCGACGG CACAGCAAAT ATCTGTCGCT
ACAGAATGGT TGGCCATTTT ACACATGGGC CATTTAAGTA AAACCGCTTT TCGACAATTA
GAATATGGCC AGCAACGTTT ATTACTCATC GCTCGCGCCA TTGTGAAACA ACCCACTTTA
TTGATCCTCG ATGAGCCTTA TCAAGGTTTG GATTATTTGG GACGCCGACT GATTAAAAAT
GCCCTTGAAC TCATTGCCAA AGAACACTTA AGTCAATTGT TGTATGTCTC GCATTATCAA
GAAGATAGCC TAGACAGTAT TCAGCACTAT ATTGAATTTG TGAAAGATGA AAATCAAGAT
GGTTATCGGG CGGTGGTTTC TCAGGGGTAA
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| Protein sequence | MKIRLTQLQC SSSSVTVDIN DWVIEPQQSW GVFSTEGDVG ALLGQLLTQQ IDAQTLTYSG
DIIGVTPASV ALVSLLEQQS LLEAILEQDD SESLGYTDPK TTVFGVVFNQ CHDNDLTHQL
LQQLDLTHLS LSPFAQLSTG EGRRVMLARA VATQVPFLVL DEPYAGLDVA HRQTLTEYLQ
QLSQTKQILV VVSREEDMPD WIEHVAMFSH GKLDTMMTKS QWDNHPVIAQ LTAQAGQQSD
DILALIRRHR HKPLFANPVF QLNNGRVAYS DKVIFSGVNW RIDNGVHWQV KGPNGCGKST
LLGLIFGDHP QCYSNDIDIF GNKRGSGESI WEIKKHIGMV SSALHLQYRV NCSALDVIVS
GFYDSIGLYQ KPTAQQISVA TEWLAILHMG HLSKTAFRQL EYGQQRLLLI ARAIVKQPTL
LILDEPYQGL DYLGRRLIKN ALELIAKEHL SQLLYVSHYQ EDSLDSIQHY IEFVKDENQD
GYRAVVSQG
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