Gene Sfri_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1406 
Symbol 
ID4277099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1678323 
End bp1678613 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content40% 
IMG OID638134180 
Productantibiotic biosynthesis monooxygenase 
Protein accessionYP_750096 
Protein GI114562583 
COG category[S] Function unknown 
COG ID[COG1359] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACATT TAACTATTGT AGCCAACATT AAAGCTAAAG CGGACAACAT TGAGTTAGTA 
AAAACTGAGT TGGTGAAGCT GATTGAAGTC ACTCGTGCTG AAGAAGGGTG TATTAGTTAT
GATTTACACC GAGACAATGA AAACTCTGCC CACTTTATGT TTTATGAGAC TTGGCAGACC
CGTGAATTAT GGCGTGTGCA TATGGAAAAT CAGCATTTAG CCGATTTTGT GGCTGCAACT
CAAGGTGCAG TTGATGAATT TACGTTGAAT GAAATGACCG TTATCGGCTA G
 
Protein sequence
MSHLTIVANI KAKADNIELV KTELVKLIEV TRAEEGCISY DLHRDNENSA HFMFYETWQT 
RELWRVHMEN QHLADFVAAT QGAVDEFTLN EMTVIG