| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1399 |
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| Symbol | |
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| ID | 4277092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1669904 |
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| End bp | 1671418 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638134173 |
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| Product | amidophosphoribosyltransferase |
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| Protein accession | YP_750089 |
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| Protein GI | 114562576 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
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| TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTGGTA TCGTCGGAAT AGTAGGAAAA TCAACAGTTA ATCAGACCAT TTATGATGCG
CTGACTGTGC TCCAACATCG TGGTCAAGAC GCAGCAGGTA TTGTGACGGT TGACATGAAT
GCGTTTCGTT TACGCAAAGC AAACGGCTTA GTCAAAGATG TGTTTGAACC TAAACATATG
CAGCGTTTAC AAGGCAATGC CGGTATTGGA CATGTTCGTT ATCCTACCGC TGGCAGCTCG
AGTGCATCAG AGGCACAACC GTTTTATGTT AACTCGCCAT TTGGTATTTC GTTAGCGCAT
AACGGTAACT TGACTAATAC GATTGAACTG GCTGCTAGCC TAGTCACAAA GCGTCGTCAT
GTTAACACTA CCTCAGATTC TGAAATCTTG TTAAATCTGT TAGCCGATGA ATTACAAGAA
ACGCGCAGTT TAACTTTAAG TGCCGACGAA GTGTTTGACG CAGTTGCTAA AGTACATGCG
CAAACGCGTG GTGCTTATGC GGTAGTTGCG ATGATTATTG GCCAAGGTTT AGTGGCATTT
CGTGACCCAT TTGGTATTCG TCCTTTGGTA TTGGGTAAAC ACGAAACCGC AACGGGTACC
GAGTATATGG TTGCTTCAGA AAGTGTTGCT TTAGACGCTG TTGGTTTTGA AGTGATGCGT
GACGTAGCAC CTGGTGAAGC TGTTTATATT TCTCTTGATG GCCAGTTATT TACCCGTCAA
TGTGCAGCAG ACCCAAGCTA TGCCCCATGT ATTTTCGAAT TCGTGTATTT TGCACGTCCC
GATTCGAGCA TTGATAAAGT GTCTGTTTAT GCAAGCCGTG TAAACATGGG CGCTAAATTA
GGCGAAAAAA TTAAGAAAGA ATGGGAAGAT CACGACATTG ATGTTGTTAT TCCTATTCCT
GAGACTTCGT GCGATATCGC ATTAGAAATT GCACGTTGCA TGGATTTACC GTACCGCCAA
GGTTTTGTGA AAAATCGTTA TATTGGTCGT ACGTTTATTA TGCCTGGGCA GTTAGAGCGT
AAAAAATCAG TACGTCGTAA ACTGAATGCG ATTAATACCG AATTTAAAGG TAAAAACGTA
TTATTGGTTG ATGACTCGAT TGTACGTGGT ACTACGTCTG AACAGATCAT TGAAATGGCG
CGTGAAGCTG GAGCAAAGAA AGTATACTTT GCATCAGCAG CACCGGAAAT CCGTTTCCCG
AATGTGTATG GTATTGATAT GCCAACGTCT AATGAGCTTA TTGCTCATGG CCGTGATGCA
GACGAAATTG CCAAAATCAT TGGTGCCGAT GGCATTATTT TCCAAGACTT AAGCGACTTA
ATTGAAGCGG TAAGAATGGA AAATCCAGAG ATTAAGCGTT TCGAAACATC AGTGTTCGAC
GGTCATTATA TTACCAACGA CGTTGACCAA GCTTACTTGG ATCATTTAAC GCAGTTACGT
AACGATGATG CCAAAGCCAA TCGCTCAAAA GACATTGGCA CTAACTTAGA AATGCACAAC
GAGTGTCATC CATAA
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| Protein sequence | MCGIVGIVGK STVNQTIYDA LTVLQHRGQD AAGIVTVDMN AFRLRKANGL VKDVFEPKHM
QRLQGNAGIG HVRYPTAGSS SASEAQPFYV NSPFGISLAH NGNLTNTIEL AASLVTKRRH
VNTTSDSEIL LNLLADELQE TRSLTLSADE VFDAVAKVHA QTRGAYAVVA MIIGQGLVAF
RDPFGIRPLV LGKHETATGT EYMVASESVA LDAVGFEVMR DVAPGEAVYI SLDGQLFTRQ
CAADPSYAPC IFEFVYFARP DSSIDKVSVY ASRVNMGAKL GEKIKKEWED HDIDVVIPIP
ETSCDIALEI ARCMDLPYRQ GFVKNRYIGR TFIMPGQLER KKSVRRKLNA INTEFKGKNV
LLVDDSIVRG TTSEQIIEMA REAGAKKVYF ASAAPEIRFP NVYGIDMPTS NELIAHGRDA
DEIAKIIGAD GIIFQDLSDL IEAVRMENPE IKRFETSVFD GHYITNDVDQ AYLDHLTQLR
NDDAKANRSK DIGTNLEMHN ECHP
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