Gene Sfri_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1397 
Symbol 
ID4277090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand
Start bp1668602 
End bp1669228 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content40% 
IMG OID638134171 
Productsporulation domain-containing protein 
Protein accessionYP_750087 
Protein GI114562574 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAATCGTC AATTTCAAAA TCGTTTGGTG GGTACCATCG TATTAGTGGC CTTAGGTGTG 
ATTTTTTTAC CCGATTTGTT AGACGGTAAA AAAACGCAGG TGGTTGAGGA GTTTACTGAA
ATTCCTTTAC GTCCAGTTCA GTCAAGTGCT TCAAATAAAG TCAATTCTGA CAATAACGCT
GAACCAGCGG AAGAATTCCA AGTGTTAACG ATTGCTGAGC CACAAGATCT CAGTAATGAT
ATCGTTGCAT TAGGGGAAGC TGAACCGAAA AAAGAATCGA CACAAGCTGT TAAGCAGCCA
GCTCCTGCTC CAGCTAAAAT TACAACAGCA GTTAAAAAGC CTGAAACCCA GGTTGTTAAT
AAAGTGAAAT CACCCATTAC TGCTGGGTTT ACATTGCAGT TAGGCGGCTT TAACAATATT
ACCAACGTAA AAGCATTGAT AGCACAACTG CGTAAAGCAG GGTTTAACGC TTATACACTG
CCTAAAGTTC CCGTAGAAGG GAAACTAACC AGAGTGTTTG TAGGCCCTGA AGTATCAGAA
GAAAAACTTA AAGCTCGTCA GCAACCTATA TTCAAATTAA CCGGATTAAA AGGCAAAATC
GTAGCCTATA ATCCACAGGA ACAATAA
 
Protein sequence
MNRQFQNRLV GTIVLVALGV IFLPDLLDGK KTQVVEEFTE IPLRPVQSSA SNKVNSDNNA 
EPAEEFQVLT IAEPQDLSND IVALGEAEPK KESTQAVKQP APAPAKITTA VKKPETQVVN
KVKSPITAGF TLQLGGFNNI TNVKALIAQL RKAGFNAYTL PKVPVEGKLT RVFVGPEVSE
EKLKARQQPI FKLTGLKGKI VAYNPQEQ