| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1391 |
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| Symbol | |
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| ID | 4277014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1657707 |
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| End bp | 1658945 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638134165 |
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| Product | beta-ketoacyl synthase |
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| Protein accession | YP_750081 |
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| Protein GI | 114562568 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.482288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACCAAA TGGATAGCAT AAAAATGAAA AGAGTCGTGA TCACCGGAAT GGGTGTTGTT
TCAAGTATCG GTAATAACAA GCTAGAAGTG ACTGAGTCAC TTAAAGCGGG TCGTAGCGGT
ATTACTCACT CGGCACAGTT TGAAGAAATG CAATTACGTA GCAAAGTTTG GGGCGACATT
AAAATGAACC CAGCTGATCA TATCGATCGT AAAGCACTTC GCTTTATGGG CGATGCTGCT
GCATATGCTT ACATTGCTAT GCAGGAAGCG ATTGCTGACG CTAACCTAAC AGAAGAGCAG
TATTCTAATT TCCGTGTCGG TTTGATTGCT GGTACGGGTG GCGCTTCTTC AAAAAACCAA
GTTCAGGCAG CTGATACACT TCGTGAAAAA GGTGTTAAGC GCGTAGGCCC TTATATTGTG
CCTCGTATTA TGTCTAGTAC TGCAAGTGCT TGCTTGGCGA CACCATTTAA AATTAAAGGT
ACGAGCTATT CAATCAGTTC AGCTTGTGCC ACTTCTGCTC ATTGTATTGG CCATGCTGTT
GAACTTATCC AAATGGGTAA GCAAGATATG GTATTTGCTG GTGGTGCTGA AGAAGTTGAT
TGGACACTCA CCATGGGCTT TGATGCTATG GGAGCACTAT CGACTAAGTA CAATGACACG
CCTGAAAAAG CGTCACGTAC ATATGATGCA GATCGTGATG GTTTTGTTAT TTCTGGCGGC
GGCGGAATTG TTGTTGTTGA AGAATTAGAA CATGCCTTAG CACGTGGCGC GAAGATTTAT
GCTGAGATTG TTGGTTACGG TGCCACATCT GACGGCTACG ACATGGTTGC TCCGTCTGGT
GAAGGTGCTG TGCGTTGTAT GCAGATGGCA CTTGCAGATG TAGACACGCC AGTTGATTAC
ATCAACACTC ATGGTACTTC TACTCCTGTA GGCGACATGC GTGAACTTGA AGCATTACGT
GAAGTGTTTG GCGATAACAT GCCTCCAATC GCATCGACTA AATCAATGAC AGGTCATGCT
TTAGGTGCAG CGGGCGTTCA TGAAGCGATT TACAGCTTAA TTATGATGGA AGACAGTTTT
ATTGCTCCAA GCATTAACAT TGACAACCTA GATGAAAAAG CAGCTGGCAT GCCAGTCGTT
CGTCAAATGC GTGAAGCTGA ATTGAACACC ATTATGAGCA ACAGTTTTGG TTTTGGTGGC
ACTAACGCAA CGTTAGTCAT GCGTAAATTT AAAGCATAA
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| Protein sequence | MYQMDSIKMK RVVITGMGVV SSIGNNKLEV TESLKAGRSG ITHSAQFEEM QLRSKVWGDI
KMNPADHIDR KALRFMGDAA AYAYIAMQEA IADANLTEEQ YSNFRVGLIA GTGGASSKNQ
VQAADTLREK GVKRVGPYIV PRIMSSTASA CLATPFKIKG TSYSISSACA TSAHCIGHAV
ELIQMGKQDM VFAGGAEEVD WTLTMGFDAM GALSTKYNDT PEKASRTYDA DRDGFVISGG
GGIVVVEELE HALARGAKIY AEIVGYGATS DGYDMVAPSG EGAVRCMQMA LADVDTPVDY
INTHGTSTPV GDMRELEALR EVFGDNMPPI ASTKSMTGHA LGAAGVHEAI YSLIMMEDSF
IAPSINIDNL DEKAAGMPVV RQMREAELNT IMSNSFGFGG TNATLVMRKF KA
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