| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_1374 |
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| Symbol | |
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| ID | 4276981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 1635522 |
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| End bp | 1636535 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 638134149 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_750065 |
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| Protein GI | 114562552 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATATT TAGTAACAGG CGCGGCGGGC TTTATTGGTA ACTTTGTTGC CGAACGCTTA
TGTGACCAAG GTCATGAGGT TGTCGGATTA GACAATTTAA ATGATTATTA CGACCCCAAT
CTAAAGTTAG CGCGTCTAAA ACGAATCGAA CATTTTAGCT CATTCCGTTT TATTAAAATG
GATATAGCAG ATAGAACTGC CATAGCTGAG TTGTTTGAAA CAGAAAAATT TGACCGCGTT
ATCCACTTAG CTGCACAAGC TGGTGTACGT TATTCTATTG AAAATCCTAT GGCCTACGTC
GATTCAAACT TAGTGGGTAT GGCAACAATT CTAGAAGGAT GTCGTCATAA TAAGGTTCAA
CACTTAGTTT ATGCTTCATC TAGTTCGGTT TACGGCATGA ACGAAAAGAT GCCTTTTTCA
ACAGAAGATG CCGTTGACCA TCCAGTGTCA CTTTATGCAG CAACGAAAAA AGCAAATGAG
TTAATGGCTC ATAGTTATAG CCATTTATAC AATTTACCTA CAACGGGTTT ACGCTTCTTT
ACTGTCTATG GTCCATGGGG CCGTCCAGAT ATGGCACCAT TTTTATTTAC CGACGCTATT
TTGAACGACA GAGAAATAAA AGTATTTAAC CACGGTAAGA TGAAACGCGA TTTCACTTAC
ATCGATGATA TTGTTGAAGG CATTATTCGT ATTCAAGATG TAGTGCCTCA GCAAGATTCA
GAAAACTCAA ACACTTCACC TTCATCAAGT AAGGCTCCTT ATAAAGTATT CAATATTGGC
AATAACGAAC CTATTGCACT GATGACCTTT ATTGAAGCAA TTGAAAAAGC AGCCGGTAAA
ATAGCAGAGA AAAATTTTAT GCCAATGCAG GCAGGTGACG TACCGGCTAC TTTTGCAGAT
ATTGATAGCC TTATTGACCA AATTAACTTC AAGCCAAGCA TGGCTATAGA CAAAGGTATC
GATAATTTTG TCCAATGGTT CATTTCTTAT TACGAAATAG CAAAGAAAAA GTGA
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| Protein sequence | MKYLVTGAAG FIGNFVAERL CDQGHEVVGL DNLNDYYDPN LKLARLKRIE HFSSFRFIKM
DIADRTAIAE LFETEKFDRV IHLAAQAGVR YSIENPMAYV DSNLVGMATI LEGCRHNKVQ
HLVYASSSSV YGMNEKMPFS TEDAVDHPVS LYAATKKANE LMAHSYSHLY NLPTTGLRFF
TVYGPWGRPD MAPFLFTDAI LNDREIKVFN HGKMKRDFTY IDDIVEGIIR IQDVVPQQDS
ENSNTSPSSS KAPYKVFNIG NNEPIALMTF IEAIEKAAGK IAEKNFMPMQ AGDVPATFAD
IDSLIDQINF KPSMAIDKGI DNFVQWFISY YEIAKKK
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