Gene Sfri_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfri_1372 
Symbol 
ID4276979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella frigidimarina NCIMB 400 
KingdomBacteria 
Replicon accessionNC_008345 
Strand- 
Start bp1632239 
End bp1632841 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content41% 
IMG OID638134147 
Producthypothetical protein 
Protein accessionYP_750063 
Protein GI114562550 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGTGTTG CCACCATAAC TGACGATTTA TTTACCACTG ATTTTTTTAC ACAAGTAGAG 
CAGCGCTATG GCTCTGATCG AGTAGAAGAT TTTAGTGACT GGCAAGACAC TATAAATGAT 
GGCGTTACAT TGAACGATTA CGACAAACTT AATTTAGCCA ATCAGTTTGC TAATAGGCGG 
ATTCGATTTG TGAGTGATAG CGACCATTGG CATAAAAGTG ATTATTGGGC CACGCCGCTT 
GAATCGTTAG GCACTAAAGG CGGCGATTGT GAAGACTTTG CCATCTTTAA GTATTTTACT 
TTAAAGGCCA TGGGGGTTGA TGAGAGCAAA ATGCGCTTGA TGTATGTGCG TGCGTTATTG 
ATTAACGAGC CTCATATGGT GTTGATTTAC TTTGAAGACC CTAAAGCGAT GCCTTTAGTG 
CTGGATAATT TAAAAACCAA AATTTTACCC GCTAACCAGC GCCGAGATTT AAAACCAATT 
TATTCATTTA ATGGTCAAGG GCTATGGTTA GCAAAGGCAC AAGGGTTGGG CAGTAACAAA 
CCCACTAGCA GCGGCACAAA AAGTTGGACT GATTTAGTTA ATCGAATTGA AAACGGCGAG 
TAA
 
Protein sequence
MCVATITDDL FTTDFFTQVE QRYGSDRVED FSDWQDTIND GVTLNDYDKL NLANQFANRR 
IRFVSDSDHW HKSDYWATPL ESLGTKGGDC EDFAIFKYFT LKAMGVDESK MRLMYVRALL 
INEPHMVLIY FEDPKAMPLV LDNLKTKILP ANQRRDLKPI YSFNGQGLWL AKAQGLGSNK 
PTSSGTKSWT DLVNRIENGE