Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_1369 |
Symbol | |
ID | 4276976 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 1628128 |
End bp | 1629312 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638134144 |
Product | methionine gamma-lyase |
Protein accession | YP_750060 |
Protein GI | 114562547 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01328] methionine gamma-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGATA ATAATCAGGG TAAATGGAAC TTAGCCACAT TAGCCATTCA TGGCGGGCAT CAACGCGAAG CCTTTGGCTC ACTCACCACA CCGTTATATC AAACCGCCAC CTTTGTATTT GATACTGCCG AACAAGGCGG AGCACGTTTT GCAGGCGAAG AGCCGGGTTA TATTTATACT CGCCTTGGTA ACCCAACCAC CGCAGAACTT GAACGTAAAA TGGCGCTGCT AGAAGGCGCA GAAGACGCAG CAGCAACTGC ATCTGGTATG GCGGCAGTAT CAAGTGCATT ATTAACTCAT TTGCATGCAG GCGATCACTT AATCGCATCT AAAGCGGTTT ATGGTTGTAC GTTCGCGCTG ATGACCACTC AGCTAACCCG CTTAGGCATT ACGAGTACAT TAGTCGACTT CACCGACATG AACGCAGTAG AGGCGGCCAT CAAGCCAAAC ACCAAAGTGC TGTTCTGCGA AACACCAGTA AACCCACATT TACAAGTATT CGATCTTACC GCCATGGCCA ACGTCGCCAA AGCGCACAAT CTAGTATCAA TCGTCGATAA CACCTTTATG ACACCACTAT TGCAGCAACC GTTAGCGTTA GGCATCGACA TGGTGATCCA CAGTGCGACC AAGTACTTAA ACGGCCATGG TGATGTAATC GCGGGTATTG TGTGCGGTAA TGCTGAGCAC ATGCACAGAT TAAAATTCGA AATATTAAAA GACTTTGGTG GCGTGATATC ACCACACGAC GCTTGGTTAA TCTTACGCGG TTTAAAAACC TTAGACGTAC GCTTAACTCG TCATTGCGAT AACGCAGAAG TGTTAGCTGA ATTTTTAGAT AAACACCCTA AATTCAGCCA GGTCTTTTAC CCAGGATTGT CGCACCACCA AGGCCATCGC TTCATTGGTA ATCAAATGAA ACGCGCCGGT GGAGTTATTG CATTTGAACT AAAAGGCGAT AAACAGGACG CCATCAACTT CGTTAATCGT GTAAAGCTAT TCACTATCGC TGTAAGTTTA GGTGACGCAG AATCGCTAAT CCAACACCCA GCATCAATGA CCCACTCGCC TTACACACCA GAAGCACGAT TAGCCGCAGG CATTACCGAC AACCTACTGC GTATCTCGGT TGGATTAGAG AATGTTCAAG ACTTGATTAC GGATATTGAA CAAGCTTTGC GTTAA
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Protein sequence | MQDNNQGKWN LATLAIHGGH QREAFGSLTT PLYQTATFVF DTAEQGGARF AGEEPGYIYT RLGNPTTAEL ERKMALLEGA EDAAATASGM AAVSSALLTH LHAGDHLIAS KAVYGCTFAL MTTQLTRLGI TSTLVDFTDM NAVEAAIKPN TKVLFCETPV NPHLQVFDLT AMANVAKAHN LVSIVDNTFM TPLLQQPLAL GIDMVIHSAT KYLNGHGDVI AGIVCGNAEH MHRLKFEILK DFGGVISPHD AWLILRGLKT LDVRLTRHCD NAEVLAEFLD KHPKFSQVFY PGLSHHQGHR FIGNQMKRAG GVIAFELKGD KQDAINFVNR VKLFTIAVSL GDAESLIQHP ASMTHSPYTP EARLAAGITD NLLRISVGLE NVQDLITDIE QALR
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